| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3972 |
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| Symbol | |
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| ID | 5060453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 4523681 |
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| End bp | 4524406 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640476232 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001160780 |
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| Protein GI | 145596483 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGGCTG CGGTGATCTT CGACCTGGAC GGTGTGATCG TGGACTCCGA ACCGGTCTGG
GAGGAGGTCC GGCGGGCGTA CGTGACGGCG CACGGCGGCA CCTGGCAGGC CGATTCGCAG
CGCCGACTGA TGGGCATGAG CACCGGTGAG TGGTCCCGCT ACCTCAGCAG TGAGCTCGGC
GTCGACCGAA CGGCCGAGCA GGTCGCCACC GAGGTGGTCG CGGAGATGTC CCGGCGGTAC
GCGCACCGCG TACCGCTGAT CGACGGGGCC GTCGATGCCG TGCGCCGGAC CGCCGGGCGG
TGGCCGCTGG GCGTGGCCAG CTCCTCCCCC ACCCAGCTGA TCCGGGCCGC GCTCGAGGCG
ACCGGGCTGG GTGACACCTT CGGCGCGACG CTGTCGACCG AGGAGACCGC GCACGGCAAG
CCGGCTCCGG ATGTCTACCT GGCGGTCGCC GCGCGGCTCG GTGTCGAGCC GGCCCGCTGT
GTCGCGGTCG AGGACTCCGC CAACGGAGTC CGGTCCGCCG CTGCCGCGGG GATGGCCGTG
GTGGCGGTAC CGCACGGGGC GTACCCGCTG GAGCCGGAGG CCGAGCGACT CGCCGCGGTG
GTGCTCTCCT CGATCGGCGA GCTGACACCG GAGACCGTGG CGACGGTCCA CGACGCCAGT
TCCCCGGTTA CGAGGACAAA GACGAATGAC TCTCGCAACA ATGACAGTGC GGGTCGCCCC
GCTTAG
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| Protein sequence | MVAAVIFDLD GVIVDSEPVW EEVRRAYVTA HGGTWQADSQ RRLMGMSTGE WSRYLSSELG
VDRTAEQVAT EVVAEMSRRY AHRVPLIDGA VDAVRRTAGR WPLGVASSSP TQLIRAALEA
TGLGDTFGAT LSTEETAHGK PAPDVYLAVA ARLGVEPARC VAVEDSANGV RSAAAAGMAV
VAVPHGAYPL EPEAERLAAV VLSSIGELTP ETVATVHDAS SPVTRTKTND SRNNDSAGRP
A
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