Gene Noca_2632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2632 
Symbol 
ID4599911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp2802708 
End bp2803364 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content72% 
IMG OID639777238 
ProductHAD family hydrolase 
Protein accessionYP_923822 
Protein GI119716857 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAGC CCACCTTGCC GGCGGCTGTC CTCTGGGACA TGGACGGCAC CCTGGTCGAC 
ACCGAGCCCT ACTGGATCGA GACCGAGTAC GAGCTGGCCG AGCGGTACGG CGGCCGCTGG
AGCGATGCGG ACGCACTCAA CCTGGTCGGC AACGACCTGC CCTCCTCGGG CCGCTACATC
CGCGAGCACA TGGGCATCGA CGTGAGCGCC GAGCAGATCG TCGAGGAGCT CCTCGACGGG
GTGGTCGGCC GGGTCGAGCG CGAGGTGCCC TGGCGGCCCG GGGCCGTCGA CCTGCTGGCC
CGGGTGCGTG CCGCCGCCAT CCCGTGCGCG CTGGTCACCA TGTCCTACGA GCGTTTCGTC
GCCCCGATCC TGGCGCAGCT GCCCGCCGAG TCGTTCCGGG TGGTCGTGAC CGGTGACCGG
GTCGAGCAGG GCAAGCCCCA CCCCGAGCCG TACCTCACCG CGGCGGCCGC GCTGGGGATC
CCGGCCGACC GATGCCTCGC GATCGAGGAC TCCAACACCG GCGCGAAGTC GGCCGAGGCC
GCCGGGTGCC TGGTCCTGGT CGTGGAGAAC CACGTCCCGG TCCTGGCCGG GCCACGCCGG
GTCTTCGCCG ACACCCTCGA CGGCCTCGAC CTCGCCGAGG TCTGGTCGCG GCGGTGA
 
Protein sequence
MTEPTLPAAV LWDMDGTLVD TEPYWIETEY ELAERYGGRW SDADALNLVG NDLPSSGRYI 
REHMGIDVSA EQIVEELLDG VVGRVEREVP WRPGAVDLLA RVRAAAIPCA LVTMSYERFV
APILAQLPAE SFRVVVTGDR VEQGKPHPEP YLTAAAALGI PADRCLAIED SNTGAKSAEA
AGCLVLVVEN HVPVLAGPRR VFADTLDGLD LAEVWSRR