| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1197 |
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| Symbol | |
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| ID | 8380374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1275127 |
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| End bp | 1275804 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645003944 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
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| Protein accession | YP_003161156 |
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| Protein GI | 256832429 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0955551 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.148864 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCGCACAC CTCAAGCTAT TTTGTGGGAC ATGGACGGTA CCCTCATCGA CTCTGAACCC
TACTGGCAAC AAGCAGAGTT CGACCTCGTT GCACAACACG GGGGAGTGTG GACGATGGAT
GACGCCCTCA ACCTCGTGGG CTACGACCTC CACGACGCGG CGAAAGTCCT TCAGCATCAT
GGGGTGGACC TTGAGGTCGA CAAGATCGTC AACTTCCTCA TCACCACCGT GTCCACTCGC
ATCTCCCGGC ATGTCCCCTG GCGCGACCAC GCGGCCGAGA CTCTCGCCTG GGTTCGTCAC
CAGCGCATCC CGTGCGCACT GGTCACCATG TCCCACACAC CAATTGCCCA AACCTTTGTT
GACTCCGCGC CACACGGAAC ATTTGACGCC GTGATCACGG GGGACATGGT TCCTCAAGGC
AAACCGCACC CAGACCCCTA CGTCATGGCA GCTCGCACCC TGGGAGTCGA CGTCACTGAG
TGCATCGCGA TTGAAGATTC CCCGACGGGA ATCACCTCAG CAATGGCCGC TGGAGCACGC
ACCATCGCCA TTCAAGCGAT CATCCCCGTC CAACCGCGCC CCCACCTGTC GCGCATCCAA
GAACTTGACC AACTCACACC ATCAGTTCTC GACGTTGTCA TGCACGGCGC AACCATCGAC
TTCTTCACTC CTGGATAA
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| Protein sequence | MRTPQAILWD MDGTLIDSEP YWQQAEFDLV AQHGGVWTMD DALNLVGYDL HDAAKVLQHH
GVDLEVDKIV NFLITTVSTR ISRHVPWRDH AAETLAWVRH QRIPCALVTM SHTPIAQTFV
DSAPHGTFDA VITGDMVPQG KPHPDPYVMA ARTLGVDVTE CIAIEDSPTG ITSAMAAGAR
TIAIQAIIPV QPRPHLSRIQ ELDQLTPSVL DVVMHGATID FFTPG
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