Gene Rleg_4948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_4948 
Symbol 
ID8007541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp329311 
End bp329982 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content52% 
IMG OID644821865 
ProductHAD-superfamily hydrolase, subfamily IA, variant 3 
Protein accessionYP_002973125 
Protein GI241113290 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTTCT CAAAAAAACC GGAATTATTG ATCTTCGACT GCGACGGGGT CCTCGTCGAT 
AGCGAGCTTA TCGCAACCGC GGTGCACATC GAAGCGTTGG CGAAGTGTGG CTATATCATA
TCCGCTGAAG AGTATAATGA TCGTTTCGTG GGAATGACTG ACCAGCAGAG TTATTCAGTC
ATAGAATCCG AGCGGGGCCT CCGCCTACCA GAGGATCACC ATGAAAGCGT TATGGCCGAA
ATCGCAAATC GTTACGCGCG TGATCTGCGC GCGACCAGCG GCGTTCGGCA AGCGTTGCAA
GCTATCAATT TGAAGAAGTG CGTCGCGTCG AACAGTGACA CTACAAAGCT CTGCTTGGCA
CTCATAGTCA CAGACCTACA CAAGTTTTTT TGGCCCCATG TCTTCAGCGC TTCGCAAGTT
GCTCGTGGGA AGCCGGCTCC GGATCTCTTT TTGTTTGCTG CACAGAATAT GAAGAAACCA
GCTGGCAGTT GTCTTGTTAT TGAAGATAGT GTTGCGGGAA CCCAGGCGGC GGTGGCTGCG
GGGATGACGG TGATTGGCTT TGTTGGTGGC TCCCATTGCC TACCTGGGCA TGGAGAAAAA
CTGGCAGAAG CAGGTGCGAT AAAGCTGTTT AATGACATGG CGGCACTGCC ACAAATCTTG
GCTCGTTTGT GA
 
Protein sequence
MSFSKKPELL IFDCDGVLVD SELIATAVHI EALAKCGYII SAEEYNDRFV GMTDQQSYSV 
IESERGLRLP EDHHESVMAE IANRYARDLR ATSGVRQALQ AINLKKCVAS NSDTTKLCLA
LIVTDLHKFF WPHVFSASQV ARGKPAPDLF LFAAQNMKKP AGSCLVIEDS VAGTQAAVAA
GMTVIGFVGG SHCLPGHGEK LAEAGAIKLF NDMAALPQIL ARL