| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2846 |
|---|
| Symbol | |
|---|
| ID | 8726596 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 3440936 |
|---|
| End bp | 3441616 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
|---|
| Protein accession | YP_003387659 |
|---|
| Protein GI | 284037729 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.281035 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.462582 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGATAAACG CAGCAATATT TGATATGGAT GGGCTGCTGG TGGATTCTGA ACCCCACTGG
CGCGCTATGG AACGGATTGT TTTTGCCTCG GTTGGCCTGC ATCTGACTGA TGATGAGTGT
AAACAAACGA CAGGGCTGCC CATTCCCGAT GTAATACACT ACTGGTTTGC CCGTGCTCCA
TGGTCAGAAG AGGCCGCAGC CGGACGCACC CATCAGGACC TGGCCAATGC CATTACCGAC
GGTGTTCATG AACGAATTGC TAATCTGGCC GAACCTATGC CCGGTGCCAT TGACGCATTG
CAGTTCTTTA CTGACCGGGG CATCCCAACC GCTATTGCCT CTGCTTCTCC CATGAGTTTG
ATCGAAGTTG TTGTCAATCG GCTGGGTATT CGGCCTTTAT TGACTTTATG GCACTCGGCT
ACGCTGGAGG CTCGTAATAA ACCGGCTCCC GATGTATACC TGGGCACTGC CCGAAAGCTG
AATGTGTTGC CCGCCACCTG TATTACGTTT GAGGACTCTG GCAGCGGGCT TAAATCGGCT
TATGCTGCTG GTATGCATAC GGTGGCCGTA CCTGCCGAAT TTGAATACAA CGACCCGAAA
TTTGCCATCG CCGACCGGAT CATCCCTTCT CTGACGGCGT TCTCGGCCGA TCTGTTTGAG
ACATTTCTGG TGAACGAATG A
|
|---|
| Protein sequence | MINAAIFDMD GLLVDSEPHW RAMERIVFAS VGLHLTDDEC KQTTGLPIPD VIHYWFARAP
WSEEAAAGRT HQDLANAITD GVHERIANLA EPMPGAIDAL QFFTDRGIPT AIASASPMSL
IEVVVNRLGI RPLLTLWHSA TLEARNKPAP DVYLGTARKL NVLPATCITF EDSGSGLKSA
YAAGMHTVAV PAEFEYNDPK FAIADRIIPS LTAFSADLFE TFLVNE
|
|---|
| |