Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4356 |
Symbol | |
ID | 5706437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 4922172 |
End bp | 4922873 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641273778 |
Product | HAD family hydrolase |
Protein accession | YP_001539128 |
Protein GI | 159039875 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.582602 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTGGCTG CGGTGATCTT CGACCTGGAC GGCGTGATCG TGGACTCCGA GCCGGTCTGG GAGGAGGTCC GGCGGGCGTA CGTGGCGGCG CACGGCGGCA CGTGGCAGGC CGACTCACAG CGCCGGCTGA TGGGCATGAG CACCGGCGAG TGGTCCCGCT ACCTGAGCGG GGAACTGGGT GTCGACCGGA CGGCCGAGCA GGTCGCCACC GAGGTGGTGG CGGACATGTC TCGGCGGTAC GCGCAACGCG TACCGCTGAT CAGCGGCGCC GTCGATGTCG TACGGCGGAC GGCCAGGCGC TGGCCGCTGG GCCTGGCCAG TTCCTCCCCG ACCCAGCTGA TCCGGGCGGC GCTGGACGCG GCCGGGCTCA GCGACACGTT CGGCGCGACG CTGTCGACCG AGCAGACGGC ACACGGCAAG CCAGCCCCGG ACGTCTACCT GGCGGTCGCC GCGCGGCTCG GCGTCGACCC GGCCCACTGT GTCGCGATCG AGGACTCCGC CAACGGTGTA CGGTCCGCGG CTGCCGCGGG GATGGCCGTG GTGGCGGTAC CGCACGGGGC GTACCCACTG GAACCGGACG CCGAGCGGCT CGCCGAGGTG GTGCTCTCCT CGATCGACGA GCTGACGCCG GAGATCGTGG CGACGGCCCA CGGCGGCAGG GGCGAGCAAC GGCCGGACAC GGCAGACCAA CAGCGCAGCT AA
|
Protein sequence | MVAAVIFDLD GVIVDSEPVW EEVRRAYVAA HGGTWQADSQ RRLMGMSTGE WSRYLSGELG VDRTAEQVAT EVVADMSRRY AQRVPLISGA VDVVRRTARR WPLGLASSSP TQLIRAALDA AGLSDTFGAT LSTEQTAHGK PAPDVYLAVA ARLGVDPAHC VAIEDSANGV RSAAAAGMAV VAVPHGAYPL EPDAERLAEV VLSSIDELTP EIVATAHGGR GEQRPDTADQ QRS
|
| |