Gene Sare_4356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4356 
Symbol 
ID5706437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp4922172 
End bp4922873 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content73% 
IMG OID641273778 
ProductHAD family hydrolase 
Protein accessionYP_001539128 
Protein GI159039875 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.582602 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGCTG CGGTGATCTT CGACCTGGAC GGCGTGATCG TGGACTCCGA GCCGGTCTGG 
GAGGAGGTCC GGCGGGCGTA CGTGGCGGCG CACGGCGGCA CGTGGCAGGC CGACTCACAG
CGCCGGCTGA TGGGCATGAG CACCGGCGAG TGGTCCCGCT ACCTGAGCGG GGAACTGGGT
GTCGACCGGA CGGCCGAGCA GGTCGCCACC GAGGTGGTGG CGGACATGTC TCGGCGGTAC
GCGCAACGCG TACCGCTGAT CAGCGGCGCC GTCGATGTCG TACGGCGGAC GGCCAGGCGC
TGGCCGCTGG GCCTGGCCAG TTCCTCCCCG ACCCAGCTGA TCCGGGCGGC GCTGGACGCG
GCCGGGCTCA GCGACACGTT CGGCGCGACG CTGTCGACCG AGCAGACGGC ACACGGCAAG
CCAGCCCCGG ACGTCTACCT GGCGGTCGCC GCGCGGCTCG GCGTCGACCC GGCCCACTGT
GTCGCGATCG AGGACTCCGC CAACGGTGTA CGGTCCGCGG CTGCCGCGGG GATGGCCGTG
GTGGCGGTAC CGCACGGGGC GTACCCACTG GAACCGGACG CCGAGCGGCT CGCCGAGGTG
GTGCTCTCCT CGATCGACGA GCTGACGCCG GAGATCGTGG CGACGGCCCA CGGCGGCAGG
GGCGAGCAAC GGCCGGACAC GGCAGACCAA CAGCGCAGCT AA
 
Protein sequence
MVAAVIFDLD GVIVDSEPVW EEVRRAYVAA HGGTWQADSQ RRLMGMSTGE WSRYLSGELG 
VDRTAEQVAT EVVADMSRRY AQRVPLISGA VDVVRRTARR WPLGLASSSP TQLIRAALDA
AGLSDTFGAT LSTEQTAHGK PAPDVYLAVA ARLGVDPAHC VAIEDSANGV RSAAAAGMAV
VAVPHGAYPL EPDAERLAEV VLSSIDELTP EIVATAHGGR GEQRPDTADQ QRS