Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1912 |
Symbol | |
ID | 8132855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2206004 |
End bp | 2206675 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644865201 |
Product | 2-deoxyglucose-6-phosphatase |
Protein accession | YP_003017489 |
Protein GI | 253688299 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0120822 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCTTTG ATTCTTCTAT ACGAGCGGCG ATTTTCGATA TGGATGGGCT GCTGATTGAT TCAGAACCGT TGTGGGATAA AGCAGAGCTG GAGGTGATCG CTTCGCTGGG CGTTGATATT TCATTGCGAC ACACAATGAA AGACACGCTG GGCCTGCGCA TCGATATGGT TGTTGAACTT TGGTATCAGC ACTCACCCTG GACGACACCA AGCCGAGACG AGGTTGTTCG CCGTATTATC GATCGCGCCA TTGAACTCGT TGCCGAACAA CGCCCGCTTC TGCCCGGCGT CGAGCATGCG CTTCAACTAT GCCGTGAACA GAATCTCAAA ATTGGGCTGG CTTCCGCGTC ACCGCTCCAT ATGCAGCAGC AGGTGCTGCG CATGTTTAAC CTGGATCACT ACTTTGATGT CTTAATGTCA GCCGAAGCGC TACCGTATAG CAAACCGCAT CCTGAAGTAT ATTTGAATGC AGCAAACGCG CTCGGCGTTT CCCCCACGCA ATGCGTGACG CTGGAAGACT CGGTGAATGG CATGATCGCC ACCAAGGCAG CACGCATGCG TTCAATCGTT ATTCCGCAGG CCGAATTCCG CGCTGATGCA CGCTGGGCGT TAGCCGATTA TAAGCTGGAT TCCCTGAATC AGCTGACCGC TGAACACCTG CTGCTAGTGT AG
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Protein sequence | MSFDSSIRAA IFDMDGLLID SEPLWDKAEL EVIASLGVDI SLRHTMKDTL GLRIDMVVEL WYQHSPWTTP SRDEVVRRII DRAIELVAEQ RPLLPGVEHA LQLCREQNLK IGLASASPLH MQQQVLRMFN LDHYFDVLMS AEALPYSKPH PEVYLNAANA LGVSPTQCVT LEDSVNGMIA TKAARMRSIV IPQAEFRADA RWALADYKLD SLNQLTAEHL LLV
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