Gene PC1_1912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1912 
Symbol 
ID8132855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2206004 
End bp2206675 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content53% 
IMG OID644865201 
Product2-deoxyglucose-6-phosphatase 
Protein accessionYP_003017489 
Protein GI253688299 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0120822 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTTTG ATTCTTCTAT ACGAGCGGCG ATTTTCGATA TGGATGGGCT GCTGATTGAT 
TCAGAACCGT TGTGGGATAA AGCAGAGCTG GAGGTGATCG CTTCGCTGGG CGTTGATATT
TCATTGCGAC ACACAATGAA AGACACGCTG GGCCTGCGCA TCGATATGGT TGTTGAACTT
TGGTATCAGC ACTCACCCTG GACGACACCA AGCCGAGACG AGGTTGTTCG CCGTATTATC
GATCGCGCCA TTGAACTCGT TGCCGAACAA CGCCCGCTTC TGCCCGGCGT CGAGCATGCG
CTTCAACTAT GCCGTGAACA GAATCTCAAA ATTGGGCTGG CTTCCGCGTC ACCGCTCCAT
ATGCAGCAGC AGGTGCTGCG CATGTTTAAC CTGGATCACT ACTTTGATGT CTTAATGTCA
GCCGAAGCGC TACCGTATAG CAAACCGCAT CCTGAAGTAT ATTTGAATGC AGCAAACGCG
CTCGGCGTTT CCCCCACGCA ATGCGTGACG CTGGAAGACT CGGTGAATGG CATGATCGCC
ACCAAGGCAG CACGCATGCG TTCAATCGTT ATTCCGCAGG CCGAATTCCG CGCTGATGCA
CGCTGGGCGT TAGCCGATTA TAAGCTGGAT TCCCTGAATC AGCTGACCGC TGAACACCTG
CTGCTAGTGT AG
 
Protein sequence
MSFDSSIRAA IFDMDGLLID SEPLWDKAEL EVIASLGVDI SLRHTMKDTL GLRIDMVVEL 
WYQHSPWTTP SRDEVVRRII DRAIELVAEQ RPLLPGVEHA LQLCREQNLK IGLASASPLH
MQQQVLRMFN LDHYFDVLMS AEALPYSKPH PEVYLNAANA LGVSPTQCVT LEDSVNGMIA
TKAARMRSIV IPQAEFRADA RWALADYKLD SLNQLTAEHL LLV