Gene Cagg_0426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0426 
Symbol 
ID7266594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp528293 
End bp528934 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content59% 
IMG OID643565293 
Productthiamine pyrophosphokinase 
Protein accessionYP_002461807 
Protein GI219847374 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1564] Thiamine pyrophosphokinase 
TIGRFAM ID[TIGR01378] thiamine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATGTCG TGATCGTTGC CAACGCACCG GGGTTGAATC TTGCGCCTTA CCACCAATTG 
CTCACGACTG CCGAACGCTT GATCGCAGCC GATGGTGGCG GGACAGCGCT CTTTACTCAT
GGATATACAC CCCACCTGTT GATCGGCGAT CTCGACTCGA TCACTCCCGA AGCGTTGGCG
GCTTATCAAG CGCAGGGAGT GGCAATTGAG CGCCACCGTC CTGATAAGGA TGAAACTGAC
CTCGAGTTGG CATTGCTAGC AGCGGTGAAC CTCGGTGCGA GCCGGATCGA CATAATCGGC
GCACTCGGCG GGCGGTGGGA TCAGTCGTTG GCGAATGTAA CCTTGTTGGG GATGGCCGAA
CTACGGGGCA GACGGGTGCG TTTACTCGAT CATCCGCAAC AGATTTGGCT GGTGACCGAT
GTGAGTGTGA TTCCCGGAGC AGTGGGGGAT ACCGTCTCGC TGCTGCCGTT CGGCGGCGAT
GCGCACGGCA TCACCACCGA AGGCTTAGCG TATCCGTTGC ACAATGGTAC ACTCTATTAC
GACCGCGCGC GTGGCGTGAG TAACGTGATC ACCGCGACCC CGGCGCAGGT GCAGGTGCGT
GATGGGGCGC TACTAATCGT ATGGACGGCG CGCGCACATT GA
 
Protein sequence
MYVVIVANAP GLNLAPYHQL LTTAERLIAA DGGGTALFTH GYTPHLLIGD LDSITPEALA 
AYQAQGVAIE RHRPDKDETD LELALLAAVN LGASRIDIIG ALGGRWDQSL ANVTLLGMAE
LRGRRVRLLD HPQQIWLVTD VSVIPGAVGD TVSLLPFGGD AHGITTEGLA YPLHNGTLYY
DRARGVSNVI TATPAQVQVR DGALLIVWTA RAH