Gene Swol_2104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_2104 
Symbol 
ID4283225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand- 
Start bp2422927 
End bp2423586 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content46% 
IMG OID638138985 
Productthiamine pyrophosphokinase 
Protein accessionYP_754767 
Protein GI114567613 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1564] Thiamine pyrophosphokinase 
TIGRFAM ID[TIGR01378] thiamine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATGCG TAATAATGGC TAACGGTGAG TACGGTAGAA TAGACCTTTA CCATCATCTT 
TTTTCCAATG CTGATGTGGT ATTATGTGCT GATGGGGGGG CCAATTATGC TTTTGCCATG 
GGTGTAGTTC CCTCCATGAT TATTGGAGAC CTTGATTCCA TCCGGCCCGA AGTTAGGGAG 
TATTTCACGG CCAAACAGGT AGAGATGAGG AAGTATCCCC GGCGTAAAGA TTATACCGAT 
ACTCAGCTAG CCCTTTCCAT AGCAAACAGG TTTGACGCTG ATGAGATAGT TTTATTGGGA 
ACTCTGGGTA AAAGGCTGGA TCATACCCTG GCCAATATCT TTTCCGGGCT GGAAATGGCC 
CGGCAAGGGA TTAGGATCAT GCACTATTCT CCAGAATGTG TAGTGTATCT GGTAACGAAA 
AACATAGTAT TTGAAGGTTG CCAGGGTGAC CTGGTATCGG TTCTGGCCCT CAGCGAAGAG 
GCACAGGGAG TATATGAGAA GGGTTTTGAG TATCAGGTTG AGGATATTGT GATGAACCTG 
GAAAACCCCT ACGGTATATC CAATGTACTT ACCGCGAAAA GCGGGGAAGT TTCCGTAAAA 
AAAGGGGTTC TGGCCGTGTT CCATTATCCC CAGGAAATAT CCAGCCCATT TACAGAATAA
 
Protein sequence
MKCVIMANGE YGRIDLYHHL FSNADVVLCA DGGANYAFAM GVVPSMIIGD LDSIRPEVRE 
YFTAKQVEMR KYPRRKDYTD TQLALSIANR FDADEIVLLG TLGKRLDHTL ANIFSGLEMA 
RQGIRIMHYS PECVVYLVTK NIVFEGCQGD LVSVLALSEE AQGVYEKGFE YQVEDIVMNL 
ENPYGISNVL TAKSGEVSVK KGVLAVFHYP QEISSPFTE