Gene Cphamn1_2486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2486 
Symbol 
ID6376182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2653105 
End bp2653803 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content50% 
IMG OID642684963 
Productbeta-phosphoglucomutase family hydrolase 
Protein accessionYP_001960861 
Protein GI189501391 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR02009] beta-phosphoglucomutase family hydrolase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.24904 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGATA GCCAACAATT TGCCTTCATC TTCGATATGG ATGGAGTTCT CGTAGACAAT 
ATGCACCTCC ATGCGCGCTC ATGGGTTGAA CTTTTCCGGG ATTACGGACT CGAGGGCCTT
GACACTGATC GCTACCTCAG GGAGACAGCC GGCATGAAAG GCCTTGATGT TCTCCGTCAT
TTTCTGGATC CGGATATTAC CCCGGAGAGA GCCGAGCACC TCACAGAGCT GAAGGATTTT
CTCTACCGTG TCATGTACAG AAAAGATATG AGCCCTATAG CGGGCCTGGA ACAATTTCTT
GATACTGCTG AATCATTGAA CATAAACCTG GGCGTCGGCA CCGGCGCCGG AGCAAGAAAT
ATTGAGTACA CCCTCGGCAT ACCGGGACTG AAAAATCGTT TTAAGGCGAT AGTCGGGTCT
CATCAGGTAA AAAACGGGAA ACCCCATCCG GATATCTTCC TTCGTGTTGC TGAGCTTCTT
GATACCGACC CGTCCAGATG TATCGTATTT GAAGATGCTC TGCCCGGTAT CGAGGCGGCA
AACGCAGCCG GCATGAAAAG CATCGCTCTT GCAACGACAA ACCCCGTTGA AATCATGAGC
ACCTGCTCAG GCGTCATGGG TGTCATAAAA GATTATACAG CCCTGAGCCC GGCCGGGGTT
CTTGAAAAAC TCTGTTTCGA ACAACCAACT GAAAGCTGA
 
Protein sequence
MPDSQQFAFI FDMDGVLVDN MHLHARSWVE LFRDYGLEGL DTDRYLRETA GMKGLDVLRH 
FLDPDITPER AEHLTELKDF LYRVMYRKDM SPIAGLEQFL DTAESLNINL GVGTGAGARN
IEYTLGIPGL KNRFKAIVGS HQVKNGKPHP DIFLRVAELL DTDPSRCIVF EDALPGIEAA
NAAGMKSIAL ATTNPVEIMS TCSGVMGVIK DYTALSPAGV LEKLCFEQPT ES