Gene Hore_10040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_10040 
Symbol 
ID7314592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand+ 
Start bp1094453 
End bp1095100 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content35% 
IMG OID643611443 
Productthiamine pyrophosphokinase 
Protein accessionYP_002508755 
Protein GI220931847 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1564] Thiamine pyrophosphokinase 
TIGRFAM ID[TIGR01378] thiamine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTGAAA AGAAAGCTGT GATTGCTTTA AACGGCTTCC TGACAGGAAA AAAAGAAGAT 
TATCAAAAAT ATATCAGGGA TATAGACCTT GTAATCGGGG CAGATGGTGG GGCTCTTTTA 
TTAAAAAAAA TTAATGTAAT TCCTGATTTA GTTATAGGTG ATTTTGATTC CCTGACTGAG 
AGTGAACTCA ACTTTTTTAA AAAACAGGGG GTAACTATAA GAAAATACCC TGTTGAGAAG 
GATGAAACTG ATGGTGAATT GGCGTTAAAT TATTGTATTG AGAAAGGTTA TGGTATAGTA 
TATTTTATTG GAGCTCTGGG AGGCAGGGTA GATCAGCAGC TTGCCAACAT ATTTTTGCTG 
GAAATGGCCA ATAGATATGG TGTTAAGGCC ATTGTTAAAG AACCTGATGA GGAGATAGGC 
TTAATTAATG ACAGATTATT GATAAGAGAT AAACAGGGGG CCAGATTCTC AATACTTCCC 
CTGGACGACA GGGTTTCTGG TGTTAGCCTT AAGGGATTTA AGTATCCCCT TAAAAATGCC 
ATTTTGAATC GATATAAAAC CAGGGGAATA AGTAATAAGA TTGTTGAAAA TAAAGCAACA 
GTTAAAGTGG AAAAAGGATT GTTGATGTAT ATTATTTCAG AAGAATAA
 
Protein sequence
MGEKKAVIAL NGFLTGKKED YQKYIRDIDL VIGADGGALL LKKINVIPDL VIGDFDSLTE 
SELNFFKKQG VTIRKYPVEK DETDGELALN YCIEKGYGIV YFIGALGGRV DQQLANIFLL 
EMANRYGVKA IVKEPDEEIG LINDRLLIRD KQGARFSILP LDDRVSGVSL KGFKYPLKNA 
ILNRYKTRGI SNKIVENKAT VKVEKGLLMY IISEE