| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3607 |
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| Symbol | |
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| ID | 5541108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4707872 |
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| End bp | 4708546 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640895726 |
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| Product | thiamine pyrophosphokinase |
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| Protein accession | YP_001433674 |
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| Protein GI | 156743545 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1564] Thiamine pyrophosphokinase |
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| TIGRFAM ID | [TIGR01378] thiamine pyrophosphokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.945813 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGTGG TCATTGTCGC CAATGCCCCG TCGTTGCGGC TCGACCCCTA CCGCGAGATG
ATTGCCGGCG CCGATCTGGT CATCGCTGCC GATGGCGGAG CGAACGCCCT TGTAGAAGCC
GGTTTCCGCC CCGCCATCGT CATCGGCGAT CTCGACTCGC TTGGCGCGAC GCGACTGGCG
TTGCTCGCGG CGGATGGCGT CGAGGTGCGC CGCTTCCCGC GCGAAAAGGA CGAGACCGAT
CTGGAACTGG CGTTGCTCCA CGCCGTCGCC ATCGGCGCAA CGCACATCGA CATTCTTGGC
GCGCTGGGAG GACGCTGGGA TCACACCTTT GCCAACGTCG CCATGCTGGC GATGCCAGAG
TTGCAGGGGC GACAGGTGCG CCTGATCGAT GAACGGCAGC GTCTGTTTCT GGTGCGCGAT
CAGGCGCTGC TCGAAGGTCA ACGTGGCGAT ACGCTGTCGC TCCTGCCGCT GACGCCGACT
GTCTGCGGGA TCACGACGCG CGGCTTATTC TATGCACTCG ACGATGCTAC GCTGCACTTT
GAGCGCGCGC GCGGCGTCAG CAACATCCTG ATCGATCCTC CCGGCTTCAT CTCCTTGCGT
GAAGGACTCC TCCTGGTCGT TCAGCACGAC GACTGCGGCG CATTCCAGTT TGCGGCGGGC
ATTGAACCTT GTTGA
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| Protein sequence | MNVVIVANAP SLRLDPYREM IAGADLVIAA DGGANALVEA GFRPAIVIGD LDSLGATRLA
LLAADGVEVR RFPREKDETD LELALLHAVA IGATHIDILG ALGGRWDHTF ANVAMLAMPE
LQGRQVRLID ERQRLFLVRD QALLEGQRGD TLSLLPLTPT VCGITTRGLF YALDDATLHF
ERARGVSNIL IDPPGFISLR EGLLLVVQHD DCGAFQFAAG IEPC
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