| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1765 |
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| Symbol | |
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| ID | 6163614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1898656 |
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| End bp | 1899366 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641664527 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001790797 |
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| Protein GI | 171058448 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0140115 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCAAG AAGCTGCCGG GAGCGGTTCG CCGCACGAGT TGAAAGCGGT CCTGTTCGAC
ATGGACGGCA CGCTGATCGA CAGCATGCCG CTGCACGAAC GTTCATGGGT GCTGTGGCAT
GCCGAGCTGG AGCTGCCCTT CGACGACCCG GACGGCTTCT TCCACGCCAC CGCCGGGCGC
ACCAACGTCG AGATCCTGCG CGACCTGTGG TCCGACCGGG CCGAGGCCGA ACTCGAGGCG
CTGGCGCACC GCAAGGAGGT GCTCTACCGC GAGATCGCCG CGCGCGAGCT GACGCTGATC
GCCGGCGCCG CCGAGGTCTG CGCGCAGGCC CGCGCCCGCG GCCTGAAGGT GGCGGTGTGC
ACCGCCGCGC CGCCCGAGAA CATCGCCGTC GCCTTCGAGC GCTTCGGCTT CGCCGCGCTG
GTCGACACCG TCACCAGCCC GGCCGATGGC CTGCGCGGCA AGCCGCACCC GGACATCTTC
GTCGAGGCCG CACGCCGCCT GGGCGTGGCA CCCGAGAACT GCCTGGTGTT CGAGGACGCC
CCGCTGGGCA TCGAGGCCGC CCGGCGCGCC GGCATGGCCG CGGTGGTGAT GACCACGACG
CTGCCGGGCA GCGCCTTCGC GCACTACCCG AACGTGATCG ACACGCTGGC CGACTACAAC
GGCTACACGC TCCCGACTCA CCTGACCAGA AAAGAGAATC CCCATGCGTG A
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| Protein sequence | MSQEAAGSGS PHELKAVLFD MDGTLIDSMP LHERSWVLWH AELELPFDDP DGFFHATAGR
TNVEILRDLW SDRAEAELEA LAHRKEVLYR EIAARELTLI AGAAEVCAQA RARGLKVAVC
TAAPPENIAV AFERFGFAAL VDTVTSPADG LRGKPHPDIF VEAARRLGVA PENCLVFEDA
PLGIEAARRA GMAAVVMTTT LPGSAFAHYP NVIDTLADYN GYTLPTHLTR KENPHA
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