More than 300 homologs were found in PanDaTox collection
for query gene Mmc1_3227 on replicon NC_008576
Organism: Magnetococcus sp. MC-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008576  Mmc1_3227  response regulator receiver protein  100 
 
 
134 aa  271  3e-72  Magnetococcus sp. MC-1  Bacteria  normal  0.30627  normal  0.696337 
 
 
-
 
NC_009767  Rcas_2286  response regulator receiver protein  40 
 
 
263 aa  89.7  1e-17  Roseiflexus castenholzii DSM 13941  Bacteria  normal  hitchhiker  0.0000997036 
 
 
-
 
NC_013411  GYMC61_2522  two component transcriptional regulator, winged helix family  35.71 
 
 
226 aa  85.1  3e-16  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007577  PMT9312_0130  two component transcriptional regulator  35.11 
 
 
260 aa  85.1  3e-16  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  0.907894  n/a   
 
 
-
 
NC_011831  Cagg_2064  response regulator receiver protein  36.51 
 
 
128 aa  84.7  4e-16  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009091  P9301_01471  two-component response regulator  35.11 
 
 
260 aa  84.7  4e-16  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  0.37604  n/a   
 
 
-
 
NC_008816  A9601_01451  two-component response regulator  35.11 
 
 
260 aa  84.7  4e-16  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.480778  n/a   
 
 
-
 
NC_009976  P9211_01421  two-component response regulator  36.36 
 
 
258 aa  84  6e-16  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  normal  0.341989 
 
 
-
 
NC_012793  GWCH70_1656  response regulator receiver protein  35.71 
 
 
166 aa  84  6e-16  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_008817  P9515_01561  two-component response regulator  34.35 
 
 
260 aa  83.6  8e-16  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  0.22181  n/a   
 
 
-
 
NC_011004  Rpal_0146  response regulator receiver protein  39.05 
 
 
121 aa  81.6  0.000000000000003  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007335  PMN2A_1494  two component transcriptional regulator  34.35 
 
 
265 aa  81.6  0.000000000000003  Prochlorococcus marinus str. NATL2A  Bacteria  normal  0.213712  n/a   
 
 
-
 
NC_008576  Mmc1_2112  Cache sensor hybrid histidine kinase  37.5 
 
 
1361 aa  82  0.000000000000003  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_008819  NATL1_02001  two-component response regulator  34.35 
 
 
265 aa  81.6  0.000000000000003  Prochlorococcus marinus str. NATL1A  Bacteria  normal  normal  0.824437 
 
 
-
 
NC_013501  Rmar_0776  response regulator receiver protein  33.05 
 
 
121 aa  81.3  0.000000000000004  Rhodothermus marinus DSM 4252  Bacteria  normal  0.428997  n/a   
 
 
-
 
NC_013223  Dret_0097  two component, sigma54 specific, transcriptional regulator, Fis family  39.42 
 
 
448 aa  81.3  0.000000000000004  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_3142  multi-sensor hybrid histidine kinase  34.4 
 
 
1352 aa  81.3  0.000000000000005  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_0742  two component transcriptional regulator  33.07 
 
 
245 aa  80.9  0.000000000000005  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_007513  Syncc9902_0314  two component transcriptional regulator  36.36 
 
 
259 aa  80.5  0.000000000000008  Synechococcus sp. CC9902  Bacteria  normal  0.645458  n/a   
 
 
-
 
NC_009943  Dole_1364  two component, sigma54 specific, Fis family transcriptional regulator  39.45 
 
 
485 aa  80.5  0.000000000000008  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011059  Paes_0925  two component, sigma54 specific, transcriptional regulator, Fis family  35.2 
 
 
484 aa  79.7  0.00000000000001  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.815173  normal 
 
 
-
 
NC_009943  Dole_1649  two component, sigma54 specific, Fis family transcriptional regulator  37.38 
 
 
479 aa  79.7  0.00000000000001  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1865  two component transcriptional regulator, winged helix family  35.77 
 
 
226 aa  79.7  0.00000000000001  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_1866  response regulator receiver modulated diguanylate cyclase  33.61 
 
 
326 aa  79.3  0.00000000000001  Salinispora arenicola CNS-205  Bacteria  normal  normal 
 
 
-
 
NC_008010  Dgeo_2844  two component transcriptional regulator  34.96 
 
 
248 aa  80.1  0.00000000000001  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0623  DNA-binding response regulator  33.33 
 
 
231 aa  79.7  0.00000000000001  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000212568  n/a   
 
 
-
 
NC_009523  RoseRS_3877  response regulator receiver protein  35.25 
 
 
130 aa  79.7  0.00000000000001  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_008262  CPR_0609  DNA-binding response regulator  33.33 
 
 
231 aa  79.7  0.00000000000001  Clostridium perfringens SM101  Bacteria  hitchhiker  0.0000282114  n/a   
 
 
-
 
NC_009675  Anae109_0415  two component transcriptional regulator  32.54 
 
 
231 aa  79.7  0.00000000000001  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.777838 
 
 
-
 
NC_009972  Haur_1474  response regulator receiver modulated metal dependent phosphohydrolase  40.15 
 
 
345 aa  79.3  0.00000000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_0644  two component transcriptional regulator, winged helix family  33.6 
 
 
236 aa  79.3  0.00000000000002  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_007494  RSP_3044  DMSO/TMAO-sensor hybrid histidine kinase  37.01 
 
 
813 aa  79  0.00000000000002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2312  response regulator receiver domain-containing protein  35.4 
 
 
121 aa  79  0.00000000000002  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_4009  two component transcriptional regulator  32.26 
 
 
230 aa  79.3  0.00000000000002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  decreased coverage  0.00751412  n/a   
 
 
-
 
NC_010338  Caul_3548  GAF sensor hybrid histidine kinase  35.16 
 
 
1942 aa  79.3  0.00000000000002  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_0332  response regulator receiver protein  34.45 
 
 
806 aa  79.3  0.00000000000002  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.112355  normal  0.937153 
 
 
-
 
NC_009050  Rsph17029_3771  Hpt sensor hybrid histidine kinase  37.01 
 
 
455 aa  79  0.00000000000002  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU2212  chemotaxis protein CheY  34.55 
 
 
128 aa  78.6  0.00000000000003  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_2324  two component transcriptional regulator, winged helix family  34.71 
 
 
223 aa  78.6  0.00000000000003  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.237639  n/a   
 
 
-
 
NC_011145  AnaeK_4125  two component transcriptional regulator, winged helix family  32.26 
 
 
230 aa  78.2  0.00000000000003  Anaeromyxobacter sp. K  Bacteria  normal  0.125271  n/a   
 
 
-
 
NC_011891  A2cp1_4151  two component transcriptional regulator, winged helix family  32.26 
 
 
230 aa  78.2  0.00000000000003  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_0465  two component transcriptional regulator  32.81 
 
 
229 aa  78.2  0.00000000000003  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_0804  two component LuxR family transcriptional regulator  32.8 
 
 
204 aa  78.6  0.00000000000003  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2165  response regulator  33.61 
 
 
393 aa  77.8  0.00000000000004  Pseudomonas putida KT2440  Bacteria  normal  0.0249002  normal  0.813701 
 
 
-
 
NC_007406  Nwi_0511  phosphate regulon transcriptional regulatory protein phoB  32.54 
 
 
234 aa  78.2  0.00000000000004  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.473137 
 
 
-
 
NC_009767  Rcas_3308  response regulator receiver protein  34.17 
 
 
130 aa  77.8  0.00000000000004  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.678314  normal  0.215079 
 
 
-
 
NC_009512  Pput_3577  response regulator receiver protein  33.61 
 
 
393 aa  77.8  0.00000000000004  Pseudomonas putida F1  Bacteria  decreased coverage  0.00266085  normal 
 
 
-
 
NC_009972  Haur_0605  adenylate/guanylate cyclase  34.75 
 
 
355 aa  78.2  0.00000000000004  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.657653  n/a   
 
 
-
 
NC_009380  Strop_1873  response regulator receiver  33.61 
 
 
326 aa  78.2  0.00000000000004  Salinispora tropica CNB-440  Bacteria  normal  normal  0.402703 
 
 
-
 
NC_008751  Dvul_1911  two component transcriptional regulator  32.52 
 
 
229 aa  78.2  0.00000000000004  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.258551 
 
 
-
 
NC_008820  P9303_26471  two-component response regulator  34.11 
 
 
268 aa  78.2  0.00000000000004  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  0.889517 
 
 
-
 
NC_010501  PputW619_1682  response regulator receiver modulated serine phosphatase  33.61 
 
 
412 aa  77.8  0.00000000000005  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_3076  two component, sigma54 specific, transcriptional regulator, Fis family  33.06 
 
 
454 aa  77.8  0.00000000000005  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_2852  histidine kinase  29.01 
 
 
1342 aa  77.8  0.00000000000005  Chitinophaga pinensis DSM 2588  Bacteria  decreased coverage  0.0012841  normal 
 
 
-
 
NC_010322  PputGB1_1706  response regulator receiver modulated serine phosphatase  33.61 
 
 
393 aa  77.8  0.00000000000005  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.000168842 
 
 
-
 
NC_009012  Cthe_1805  response regulator receiver modulated diguanylate cyclase  36.92 
 
 
310 aa  77.8  0.00000000000005  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.0638722  n/a   
 
 
-
 
NC_009767  Rcas_3309  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  35.83 
 
 
900 aa  77.4  0.00000000000006  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.269875  normal  0.342346 
 
 
-
 
NC_009674  Bcer98_0503  two component transcriptional regulator  36.29 
 
 
223 aa  77.4  0.00000000000006  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_1706  response regulator receiver protein  31.71 
 
 
131 aa  77.4  0.00000000000007  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_0107  PAS/PAC sensor hybrid histidine kinase  38.26 
 
 
774 aa  77.4  0.00000000000007  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_1246  CheA signal transduction histidine kinases  36.52 
 
 
1643 aa  77.4  0.00000000000007  Methylobacillus flagellatus KT  Bacteria  normal  0.0708097  normal  0.755815 
 
 
-
 
NC_007963  Csal_0717  two component, sigma54 specific, Fis family transcriptional regulator  33.59 
 
 
466 aa  77.4  0.00000000000007  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_2887  LuxR family two component transcriptional regulator  30.89 
 
 
225 aa  77.4  0.00000000000007  'Nostoc azollae' 0708  Bacteria  normal  0.526109  n/a   
 
 
-
 
NC_004116  SAG0123  DNA-binding response regulator  33.33 
 
 
223 aa  77  0.00000000000008  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A0568  response regulator  35.92 
 
 
368 aa  77  0.00000000000008  Vibrio cholerae O395  Bacteria  hitchhiker  0.00216047  n/a   
 
 
-
 
NC_009616  Tmel_0843  response regulator receiver protein  34.17 
 
 
122 aa  77  0.00000000000008  Thermosipho melanesiensis BI429  Bacteria  normal  0.774989  n/a   
 
 
-
 
NC_007413  Ava_3628  two component LuxR family transcriptional regulator  30.89 
 
 
225 aa  77  0.00000000000009  Anabaena variabilis ATCC 29413  Bacteria  normal  0.717242  normal  0.142765 
 
 
-
 
NC_007516  Syncc9605_2378  two component transcriptional regulator  33.33 
 
 
262 aa  77  0.00000000000009  Synechococcus sp. CC9605  Bacteria  normal  normal  0.936352 
 
 
-
 
NC_012854  Rleg_6517  two component transcriptional regulator, winged helix family  35.38 
 
 
228 aa  76.6  0.0000000000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0325894 
 
 
-
 
NC_011831  Cagg_2467  response regulator receiver modulated serine phosphatase  32.2 
 
 
385 aa  76.3  0.0000000000001  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_0578  integral membrane sensor hybrid histidine kinase  35.59 
 
 
667 aa  76.6  0.0000000000001  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0565  two component transcriptional regulator  34.15 
 
 
225 aa  76.6  0.0000000000001  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_5066  response regulator receiver modulated diguanylate cyclase  38.24 
 
 
338 aa  76.3  0.0000000000001  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_011981  Avi_7488  two component response regulator  32.54 
 
 
228 aa  76.6  0.0000000000001  Agrobacterium vitis S4  Bacteria  normal  0.461205  n/a   
 
 
-
 
NC_011666  Msil_0423  response regulator receiver protein  31.09 
 
 
123 aa  76.3  0.0000000000001  Methylocella silvestris BL2  Bacteria  n/a    normal  0.89687 
 
 
-
 
NC_009486  Tpet_1136  two component transcriptional regulator  29.51 
 
 
239 aa  76.6  0.0000000000001  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000000652217  n/a   
 
 
-
 
NC_007404  Tbd_1625  response regulator receiver domain-containing protein  30.83 
 
 
120 aa  76.3  0.0000000000001  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.608115 
 
 
-
 
NC_010320  Teth514_1997  two component transcriptional regulator  33.33 
 
 
234 aa  76.3  0.0000000000001  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.000000742772  n/a   
 
 
-
 
NC_011729  PCC7424_2267  two component transcriptional regulator, AraC family  33.08 
 
 
265 aa  76.6  0.0000000000001  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.00808217 
 
 
-
 
NC_010483  TRQ2_1174  two component transcriptional regulator  29.51 
 
 
239 aa  76.6  0.0000000000001  Thermotoga sp. RQ2  Bacteria  normal  0.0181894  n/a   
 
 
-
 
NC_011901  Tgr7_0506  adenylate/guanylate cyclase  33.06 
 
 
380 aa  76.6  0.0000000000001  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.149903  n/a   
 
 
-
 
NC_011772  BCG9842_B4651  DNA-binding response regulator  34.13 
 
 
225 aa  76.3  0.0000000000001  Bacillus cereus G9842  Bacteria  hitchhiker  0.00217543  unclonable  3.82242e-26 
 
 
-
 
NC_008554  Sfum_2764  two component, sigma54 specific, Fis family transcriptional regulator  37.5 
 
 
466 aa  76.6  0.0000000000001  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_1627  response regulator receiver protein  33.33 
 
 
119 aa  76.6  0.0000000000001  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_6237  integral membrane sensor hybrid histidine kinase  35.04 
 
 
721 aa  75.9  0.0000000000002  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.703753 
 
 
-
 
NC_010172  Mext_4718  phosphate regulon transcriptional regulatory protein PhoB  35.83 
 
 
239 aa  75.9  0.0000000000002  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.220817 
 
 
-
 
NC_005945  BAS0618  DNA-binding response regulator  33.33 
 
 
225 aa  75.5  0.0000000000002  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A2938  transcriptional regulator ZraR  33.06 
 
 
445 aa  75.5  0.0000000000002  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A2804  transcriptional regulatory protein ZraR  33.06 
 
 
445 aa  75.5  0.0000000000002  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C2825  transcriptional regulator ZraR  33.06 
 
 
445 aa  75.5  0.0000000000002  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.479389  normal 
 
 
-
 
NC_011149  SeAg_B2721  sigma-54 dependent transcriptional regulator/response regulator  33.06 
 
 
445 aa  75.5  0.0000000000002  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1544  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  36.67 
 
 
739 aa  75.5  0.0000000000002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.498595 
 
 
-
 
NC_007530  GBAA_0651  DNA-binding response regulator  33.33 
 
 
225 aa  75.5  0.0000000000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1237  two component transcriptional regulator, winged helix family  31.4 
 
 
234 aa  75.9  0.0000000000002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.178035  n/a   
 
 
-
 
NC_011725  BCB4264_A0687  DNA-binding response regulator  34.13 
 
 
225 aa  75.9  0.0000000000002  Bacillus cereus B4264  Bacteria  normal  0.037102  n/a   
 
 
-
 
NC_007948  Bpro_1956  two component transcriptional regulator  34.45 
 
 
223 aa  75.9  0.0000000000002  Polaromonas sp. JS666  Bacteria  decreased coverage  0.0000121146  normal  0.806146 
 
 
-
 
NC_011083  SeHA_C4505  transcriptional regulatory protein ZraR  34.29 
 
 
441 aa  75.9  0.0000000000002  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.11324 
 
 
-
 
NC_009972  Haur_3458  multi-sensor signal transduction histidine kinase  36.89 
 
 
958 aa  75.9  0.0000000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_4323  two component LuxR family transcriptional regulator  31.67 
 
 
215 aa  75.9  0.0000000000002  Trichodesmium erythraeum IMS101  Bacteria  normal  0.115662  normal  0.727411 
 
 
-
 
NC_008532  STER_1116  DNA-binding response regulator  32.26 
 
 
235 aa  75.5  0.0000000000002  Streptococcus thermophilus LMD-9  Bacteria  normal  0.310768  n/a   
 
 
-
 
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