Gene Mmc1_3227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3227 
Symbol 
ID4481892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4016905 
End bp4017309 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content49% 
IMG OID639723976 
Productresponse regulator receiver protein 
Protein accessionYP_867123 
Protein GI117926506 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.30627 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.696337 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACCA TTTTATTTAT TGATGATGAT GAGGTGATGT TAACCCTTAT CTCACCGCAA 
TTGGAGGAGT TTGGCTACCA ACTGGTGCAT GCCTTCTCCG GGCGGGAAGG TATGCAGGCC
TTACAAGAGC ATGCCATAGA TCTGATTTTA ACCGACCTAG ATATGCCGGA CATGAACGGT
ATAGAGATGA TTCAACAGAT CCGAGCACAG GAGGAGAGTG CGCATATTCC GATCGTCGTA
TTAACCGCAT ACGACTCATT GGTACTCTCC AAACAAGCGA CAAGTTTGGG GGCTGACCTG
TTCCAAAGCA AGCCGGTGGA TGTGGCCCGT CTACATCCTG AGTTGCAGGC ATTATTAAAC
AAAACCTCTG CCGCCAAGCT TGGTGGCAGC AGTCGACAGA ACTGA
 
Protein sequence
MATILFIDDD EVMLTLISPQ LEEFGYQLVH AFSGREGMQA LQEHAIDLIL TDLDMPDMNG 
IEMIQQIRAQ EESAHIPIVV LTAYDSLVLS KQATSLGADL FQSKPVDVAR LHPELQALLN
KTSAAKLGGS SRQN