Gene Syncc9902_0314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0314 
Symbol 
ID3743549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp325529 
End bp326308 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content55% 
IMG OID637770482 
Producttwo component transcriptional regulator 
Protein accessionYP_376330 
Protein GI78183896 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.645458 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCCCT GCATCCTGTT GATCGAAGAC GACCAGGACA TGCGCGACCT GGTGAGCGGC 
CATCTAGAGC ACAGCGGCTT CGATGTTCAG CGCGCAGACG ACGGCATCAA AGGCCAAGCA
CTGGCACTTC AGTACACACC AGATTTAATC CTTCTCGACT TGATGCTGCC CAAAGTGGAC
GGCCTCACCC TGTGTCAACG CTTGCGTCGA GACGAACGAA CTGCAGGCAT TCCAATTTTG
ATGCTCACTG CTCTTGGTGG AACCAAAGAC AAAGTGAGCG GTTTCAACTC TGGTGCCGAC
GATTACCTCA CCAAACCGTT CGATCTCGAA GAACTTCAAG TTCGAATCAA GGCACTGCTT
CGCCGGAGTG ATCGTGCTCC ATTGGGTGCC AGCAATCAGA ACGAAATCCT CAGCTACGGC
CCTCTCACTC TTGTGCCAGA GCGGTTTGAA GCGATCTGGT TCGATAGTCC AGTTCGGTTA
ACTCACCTGG AATTCGAGTT GCTGCATTGC CTCCTTCAGC GCCACGGACA AACAGTGGCC
CCATCATTGA TTCTGAAGGA AGTTTGGGGA TACGAACCCG ACGACGATAT CGAAACGATC
CGCGTACACG TCAGACACCT ACGCACCAAG CTCGAGCCCG ATCCCCGCAA ACCTCGGTTC
ATCAAAACGG TGTATGGGGC CGGCTATTGC CTAGAGCTTC CCACTGGTGG ACAACTTGAT
GATGTGGTCT CGCTTGCGCG GGAAGAGCGC AAACAGCAAG GCGACCGCGC TACCGCTTAG
 
Protein sequence
MKPCILLIED DQDMRDLVSG HLEHSGFDVQ RADDGIKGQA LALQYTPDLI LLDLMLPKVD 
GLTLCQRLRR DERTAGIPIL MLTALGGTKD KVSGFNSGAD DYLTKPFDLE ELQVRIKALL
RRSDRAPLGA SNQNEILSYG PLTLVPERFE AIWFDSPVRL THLEFELLHC LLQRHGQTVA
PSLILKEVWG YEPDDDIETI RVHVRHLRTK LEPDPRKPRF IKTVYGAGYC LELPTGGQLD
DVVSLAREER KQQGDRATA