Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_0314 |
Symbol | |
ID | 3743549 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | - |
Start bp | 325529 |
End bp | 326308 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637770482 |
Product | two component transcriptional regulator |
Protein accession | YP_376330 |
Protein GI | 78183896 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.645458 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCCCT GCATCCTGTT GATCGAAGAC GACCAGGACA TGCGCGACCT GGTGAGCGGC CATCTAGAGC ACAGCGGCTT CGATGTTCAG CGCGCAGACG ACGGCATCAA AGGCCAAGCA CTGGCACTTC AGTACACACC AGATTTAATC CTTCTCGACT TGATGCTGCC CAAAGTGGAC GGCCTCACCC TGTGTCAACG CTTGCGTCGA GACGAACGAA CTGCAGGCAT TCCAATTTTG ATGCTCACTG CTCTTGGTGG AACCAAAGAC AAAGTGAGCG GTTTCAACTC TGGTGCCGAC GATTACCTCA CCAAACCGTT CGATCTCGAA GAACTTCAAG TTCGAATCAA GGCACTGCTT CGCCGGAGTG ATCGTGCTCC ATTGGGTGCC AGCAATCAGA ACGAAATCCT CAGCTACGGC CCTCTCACTC TTGTGCCAGA GCGGTTTGAA GCGATCTGGT TCGATAGTCC AGTTCGGTTA ACTCACCTGG AATTCGAGTT GCTGCATTGC CTCCTTCAGC GCCACGGACA AACAGTGGCC CCATCATTGA TTCTGAAGGA AGTTTGGGGA TACGAACCCG ACGACGATAT CGAAACGATC CGCGTACACG TCAGACACCT ACGCACCAAG CTCGAGCCCG ATCCCCGCAA ACCTCGGTTC ATCAAAACGG TGTATGGGGC CGGCTATTGC CTAGAGCTTC CCACTGGTGG ACAACTTGAT GATGTGGTCT CGCTTGCGCG GGAAGAGCGC AAACAGCAAG GCGACCGCGC TACCGCTTAG
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Protein sequence | MKPCILLIED DQDMRDLVSG HLEHSGFDVQ RADDGIKGQA LALQYTPDLI LLDLMLPKVD GLTLCQRLRR DERTAGIPIL MLTALGGTKD KVSGFNSGAD DYLTKPFDLE ELQVRIKALL RRSDRAPLGA SNQNEILSYG PLTLVPERFE AIWFDSPVRL THLEFELLHC LLQRHGQTVA PSLILKEVWG YEPDDDIETI RVHVRHLRTK LEPDPRKPRF IKTVYGAGYC LELPTGGQLD DVVSLAREER KQQGDRATA
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