| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2286 |
|---|
| Symbol | |
|---|
| ID | 5539767 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 2948618 |
|---|
| End bp | 2949409 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640894419 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_001432387 |
|---|
| Protein GI | 156742258 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0000997036 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAATATCA TGAGCGCCAC TATTATGGTC GTCGATGACG ACCCTGCGAT CAGCACCCTG
ATCAGTCACC AGCTTCGCAG CCTTGGGTAT CGCACGGTCT GCCTGCGTGA CGGACTTCAA
GCGCTCCAGC AGATGGCGAT CATTCAACCA GACCTGGTGC TACTGGATGT CATGATGCCG
CATATGAGCG GGTGGGACAT ATGTCGTCAG ATTCGCGCCT GTTCCGAGGC GCCGATTATT
CTTTTGACTG CCAAAGATGC CGATGCCGAT GTGATCAACG GATTGAATGC CGGCGCTGAT
GACTATGTTA CCAAACCATA CCGGATTGCG CAGTTGCACG CGCGCATCGA GGCGGCGCTG
CGACGGTCGG TGCAACGGAC GCGACCACGT CCTGCCGCGC GCGTCGGTTC CGCATCCGAC
GGCAGCCGTC TGTCTCCGCC AGCGCCATCG GCGCCGCAGA CGCTTGAGAC TGCGCCAACG
AAGCCGCCGG TGACGACACC CCGACTTCGG CTTGGTGCAA CGTTGCGCGA GGAGCGACTG
CGGCGGGGAG TGTCGCTGTA TCAGGCGGAG CAGATCTGCC GTGTGCGCTG GGATTATCTG
CAAGCGATCG AGCAGGAGCA GTGGGAGTAT GTGCCCCAGG CGCGCCGGCA AGCCGCCATT
CGCGCCTATG CCGCGTACCT TGGCGTTCCC TTGCGCTATC CCCAACCGAG GCGAGCATCG
CTTGCGTCGG TGGCCGCACC GCTGGTTGCC GTCGCGTTGA TGTTGGTGGT TGTCGTTGTT
TACTTTCTTT AG
|
|---|
| Protein sequence | MNIMSATIMV VDDDPAISTL ISHQLRSLGY RTVCLRDGLQ ALQQMAIIQP DLVLLDVMMP
HMSGWDICRQ IRACSEAPII LLTAKDADAD VINGLNAGAD DYVTKPYRIA QLHARIEAAL
RRSVQRTRPR PAARVGSASD GSRLSPPAPS APQTLETAPT KPPVTTPRLR LGATLREERL
RRGVSLYQAE QICRVRWDYL QAIEQEQWEY VPQARRQAAI RAYAAYLGVP LRYPQPRRAS
LASVAAPLVA VALMLVVVVV YFL
|
|---|
| |