More than 300 homologs were found in PanDaTox collection
for query gene Csal_0717 on replicon NC_007963
Organism: Chromohalobacter salexigens DSM 3043



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011080  SNSL254_A2763  transcriptional regulator ZraR  70.98 
 
 
445 aa  648    Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_2768  putative two component, sigma54 specific, transcriptional regulator, Fis family  70.52 
 
 
445 aa  635    Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A2804  transcriptional regulatory protein ZraR  70.98 
 
 
445 aa  647    Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_3651  two component, sigma54 specific, Fis family transcriptional regulator  71.66 
 
 
445 aa  651    Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_1085  putative two component, sigma54 specific, transcriptional regulator, Fis family  70.14 
 
 
445 aa  636    Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B2721  sigma-54 dependent transcriptional regulator/response regulator  70.98 
 
 
445 aa  649    Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A2938  transcriptional regulator ZraR  70.98 
 
 
445 aa  648    Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_010159  YpAngola_A3629  two-component system response regulator  70.98 
 
 
445 aa  647    Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_1259  two component, sigma54 specific, Fis family transcriptional regulator  70.98 
 
 
445 aa  647    Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_0717  two component, sigma54 specific, Fis family transcriptional regulator  100 
 
 
466 aa  948    Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1152  sigma-54 dependent DNA-binding response regulator  70.98 
 
 
445 aa  647    Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C2825  transcriptional regulator ZraR  70.98 
 
 
445 aa  648    Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.479389  normal 
 
 
-
 
NC_012917  PC1_3049  putative two component, sigma54 specific, transcriptional regulator, Fis family  72.11 
 
 
445 aa  649    Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1226  putative two component, sigma54 specific, transcriptional regulator, Fis family  72.11 
 
 
445 aa  649    Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_3039  two component, sigma54 specific, Fis family transcriptional regulator  69.84 
 
 
445 aa  635    Enterobacter sp. 638  Bacteria  normal  0.992832  normal  0.337936 
 
 
-
 
CP001509  ECD_02446  predicted DNA-binding response regulator in two-component system  69.96 
 
 
444 aa  625  1e-178  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_1114  putative two component, sigma54 specific, transcriptional regulator, Fis family  69.96 
 
 
444 aa  625  1e-178  Escherichia coli DH1  Bacteria  normal  0.922386  n/a   
 
 
-
 
NC_009800  EcHS_A2707  sigma-54 dependent response regulator  70.18 
 
 
444 aa  626  1e-178  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_1123  two component, sigma54 specific, Fis family transcriptional regulator  69.96 
 
 
444 aa  625  1e-178  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_009801  EcE24377A_2839  sigma-54 dependent response regulator  70.18 
 
 
444 aa  626  1e-178  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E2919  sigma-54 dependent response regulator  69.96 
 
 
444 aa  625  1e-178  Shigella boydii CDC 3083-94  Bacteria  normal  0.70731  n/a   
 
 
-
 
NC_012892  B21_02410  hypothetical protein  69.96 
 
 
444 aa  625  1e-178  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_2707  sigma-54 dependent response regulator  70.18 
 
 
444 aa  626  1e-178  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_011353  ECH74115_3788  sigma-54 dependent response regulator  69.96 
 
 
444 aa  625  1e-178  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_1603  two component, sigma54 specific, Fis family transcriptional regulator  62.73 
 
 
449 aa  573  1.0000000000000001e-162  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_01723  two-component system response regulator  63.18 
 
 
446 aa  567  1e-160  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_4272  sigma-54 dependent response regulator  58.78 
 
 
457 aa  533  1e-150  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_0965  putative two component, sigma54 specific, transcriptional regulator, Fis family  59.69 
 
 
462 aa  533  1e-150  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_0911  two component, sigma54 specific, Fis family transcriptional regulator  58.02 
 
 
456 aa  531  1e-149  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_1055  two component, sigma54 specific, Fis family transcriptional regulator  58.02 
 
 
456 aa  531  1e-149  Methylobacillus flagellatus KT  Bacteria  normal  0.523432  normal 
 
 
-
 
NC_007948  Bpro_1117  two component, sigma54 specific, Fis family transcriptional regulator  58.47 
 
 
466 aa  528  1e-149  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_1804  two component, sigma54 specific, Fis family transcriptional regulator  58.81 
 
 
469 aa  521  1e-147  Dechloromonas aromatica RCB  Bacteria  normal  0.0358984  normal  0.379225 
 
 
-
 
NC_007908  Rfer_2786  two component, sigma54 specific, Fis family transcriptional regulator  57.68 
 
 
477 aa  524  1e-147  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_0872  two component, sigma54 specific, Fis family transcriptional regulator  57.17 
 
 
471 aa  521  1e-146  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0650247 
 
 
-
 
NC_007614  Nmul_A1161  two component, sigma54 specific, Fis family transcriptional regulator  58.8 
 
 
453 aa  517  1.0000000000000001e-145  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_3376  two component, sigma54 specific, Fis family transcriptional regulator  57.27 
 
 
462 aa  516  1.0000000000000001e-145  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.193945  normal 
 
 
-
 
NC_007484  Noc_0785  Fis family two component transcriptional regulator  58.28 
 
 
456 aa  511  1e-143  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_1340  two component, sigma54 specific, Fis family transcriptional regulator  58.39 
 
 
457 aa  511  1e-143  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_2771  two component Fis family transcriptional regulator  58.09 
 
 
449 aa  505  9.999999999999999e-143  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.195731 
 
 
-
 
NC_007498  Pcar_0498  two component response regulator  59.2 
 
 
451 aa  504  1e-141  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_2494  response regulator receiver protein  57.02 
 
 
452 aa  502  1e-141  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011761  AFE_2955  sigma-54 dependent DNA-binding response regulator, putative  58.08 
 
 
457 aa  500  1e-140  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_2568  two component, sigma54 specific, transcriptional regulator, Fis family  58.08 
 
 
457 aa  500  1e-140  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.0491002  normal 
 
 
-
 
NC_002977  MCA1713  sigma-54 dependent DNA-binding response regulator  58.04 
 
 
460 aa  496  1e-139  Methylococcus capsulatus str. Bath  Bacteria  normal  0.91858  n/a   
 
 
-
 
NC_011662  Tmz1t_1222  putative two component, sigma54 specific, transcriptional regulator, Fis family  56.09 
 
 
475 aa  485  1e-136  Thauera sp. MZ1T  Bacteria  normal  0.20015  n/a   
 
 
-
 
NC_007520  Tcr_2187  two component, sigma54 specific, Fis family transcriptional regulator  54.32 
 
 
456 aa  478  1e-134  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_011761  AFE_0447  sigma-54 dependent DNA-binding response regulator  49.23 
 
 
461 aa  432  1e-120  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_0608  two component, sigma54 specific, transcriptional regulator, Fis family  49.23 
 
 
461 aa  432  1e-120  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_2292  two component, sigma54 specific, Fis family transcriptional regulator  44.69 
 
 
462 aa  384  1e-105  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
CP001509  ECD_03881  fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein  45.58 
 
 
441 aa  374  1e-102  Escherichia coli BL21(DE3)  Bacteria  normal  0.0124745  n/a   
 
 
-
 
CP001637  EcDH1_3989  two component, sigma54 specific, transcriptional regulator, Fis family  45.58 
 
 
441 aa  374  1e-102  Escherichia coli DH1  Bacteria  normal  0.716922  n/a   
 
 
-
 
NC_010658  SbBS512_E4497  transcriptional regulatory protein ZraR  45.58 
 
 
441 aa  375  1e-102  Shigella boydii CDC 3083-94  Bacteria  hitchhiker  0.0000279415  n/a   
 
 
-
 
NC_010498  EcSMS35_4454  transcriptional regulatory protein ZraR  45.35 
 
 
441 aa  375  1e-102  Escherichia coli SMS-3-5  Bacteria  normal  0.209341  hitchhiker  0.000519331 
 
 
-
 
NC_012892  B21_03834  hypothetical protein  45.58 
 
 
441 aa  374  1e-102  Escherichia coli BL21  Bacteria  normal  0.0118236  n/a   
 
 
-
 
NC_010468  EcolC_4021  transcriptional regulatory protein ZraR  45.58 
 
 
441 aa  374  1e-102  Escherichia coli ATCC 8739  Bacteria  normal  0.0128092  normal  0.0227655 
 
 
-
 
NC_009801  EcE24377A_4549  transcriptional regulatory protein ZraR  45.35 
 
 
441 aa  373  1e-102  Escherichia coli E24377A  Bacteria  hitchhiker  0.000369022  n/a   
 
 
-
 
NC_011353  ECH74115_5475  transcriptional regulatory protein ZraR  45.12 
 
 
441 aa  369  1e-101  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A4238  transcriptional regulatory protein ZraR  45.35 
 
 
441 aa  372  1e-101  Escherichia coli HS  Bacteria  normal  0.020936  n/a   
 
 
-
 
NC_011083  SeHA_C4505  transcriptional regulatory protein ZraR  45.62 
 
 
441 aa  366  1e-100  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.11324 
 
 
-
 
NC_011080  SNSL254_A4507  transcriptional regulatory protein ZraR  45.85 
 
 
441 aa  365  1e-100  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal  0.0570238 
 
 
-
 
NC_011149  SeAg_B4418  transcriptional regulatory protein ZraR  45.64 
 
 
441 aa  366  1e-100  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.298897  n/a   
 
 
-
 
NC_011094  SeSA_A4385  transcriptional regulatory protein ZraR  45.62 
 
 
441 aa  365  1e-100  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.712665 
 
 
-
 
NC_011205  SeD_A4581  transcriptional regulatory protein ZraR  45.85 
 
 
441 aa  366  1e-100  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_0173  two component, sigma54 specific, transcriptional regulator, Fis family  43.08 
 
 
463 aa  358  1.9999999999999998e-97  Ammonifex degensii KC4  Bacteria  normal  0.127235  n/a   
 
 
-
 
NC_002967  TDE1969  sigma-54 dependent transcriptional regulator/response regulator  41.93 
 
 
473 aa  357  3.9999999999999996e-97  Treponema denticola ATCC 35405  Bacteria  normal  0.440374  n/a   
 
 
-
 
NC_013385  Adeg_0532  two component, sigma54 specific, transcriptional regulator, Fis family  44.47 
 
 
470 aa  352  8e-96  Ammonifex degensii KC4  Bacteria  hitchhiker  0.00706375  n/a   
 
 
-
 
NC_013223  Dret_0970  two component, sigma54 specific, transcriptional regulator, Fis family  41.68 
 
 
473 aa  346  4e-94  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0157817  hitchhiker  0.00000223455 
 
 
-
 
NC_007517  Gmet_0702  two component, sigma54 specific, Fis family transcriptional regulator  41.41 
 
 
460 aa  345  8e-94  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_1971  two component, sigma54 specific, transcriptional regulator, Fis family  42.44 
 
 
473 aa  345  1e-93  Anaeromyxobacter sp. K  Bacteria  normal  0.0887215  n/a   
 
 
-
 
NC_010468  EcolC_1430  acetoacetate metabolism regulatory protein AtoC  40.92 
 
 
461 aa  345  1e-93  Escherichia coli ATCC 8739  Bacteria  normal  0.324678  hitchhiker  0.00137179 
 
 
-
 
NC_011891  A2cp1_2056  two component, sigma54 specific, transcriptional regulator, Fis family  42.44 
 
 
473 aa  345  1e-93  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.732718  n/a   
 
 
-
 
CP001509  ECD_02147  fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein  40.92 
 
 
461 aa  344  2e-93  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_1438  two component, sigma54 specific, transcriptional regulator, Fis family  40.92 
 
 
461 aa  344  2e-93  Escherichia coli DH1  Bacteria  normal  0.445705  n/a   
 
 
-
 
NC_009800  EcHS_A2361  acetoacetate metabolism regulatory protein AtoC  40.92 
 
 
461 aa  344  2e-93  Escherichia coli HS  Bacteria  normal  0.18992  n/a   
 
 
-
 
NC_012892  B21_02106  hypothetical protein  40.92 
 
 
461 aa  344  2e-93  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2401  two component, sigma54 specific, Fis family transcriptional regulator  43.53 
 
 
449 aa  344  2e-93  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_1954  two component, sigma54 specific, transcriptional regulator, Fis family  41.83 
 
 
464 aa  343  2.9999999999999997e-93  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.611403  n/a   
 
 
-
 
NC_007519  Dde_1685  two component Fis family transcriptional regulator  43.9 
 
 
457 aa  343  2.9999999999999997e-93  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00529377  n/a   
 
 
-
 
NC_011145  AnaeK_1869  two component, sigma54 specific, transcriptional regulator, Fis family  41.83 
 
 
464 aa  343  2.9999999999999997e-93  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_2369  acetoacetate metabolism regulatory protein AtoC  40.7 
 
 
461 aa  343  5e-93  Escherichia coli SMS-3-5  Bacteria  normal  0.0790211  normal 
 
 
-
 
NC_011830  Dhaf_0198  two component, sigma54 specific, transcriptional regulator, Fis family  38.51 
 
 
461 aa  342  5.999999999999999e-93  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_2009  two component, sigma54 specific, Fis family transcriptional regulator  42.16 
 
 
463 aa  342  5.999999999999999e-93  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1908  two component, sigma54 specific, Fis family transcriptional regulator  42.21 
 
 
473 aa  342  7e-93  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_1013  two component, sigma54 specific, transcriptional regulator, Fis family  41.48 
 
 
456 aa  342  7e-93  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.0616674 
 
 
-
 
NC_009483  Gura_0085  two component, sigma-54 specific, Fis family transcriptional regulator  42.69 
 
 
452 aa  342  7e-93  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3335  two component, sigma-54 specific, Fis family transcriptional regulator  39.04 
 
 
458 aa  342  1e-92  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_2280  two component, sigma54 specific, transcriptional regulator, Fis family  40.79 
 
 
453 aa  341  1e-92  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.620123 
 
 
-
 
NC_007517  Gmet_0776  two component, sigma54 specific, Fis family transcriptional regulator  39.87 
 
 
454 aa  341  2e-92  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_008607  Ppro_3647  two component, sigma54 specific, Fis family transcriptional regulator  41.33 
 
 
451 aa  341  2e-92  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1428  two component, sigma-54 specific, Fis family transcriptional regulator  39.25 
 
 
460 aa  340  2.9999999999999998e-92  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_3076  two component, sigma54 specific, transcriptional regulator, Fis family  41.59 
 
 
454 aa  340  4e-92  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2149  two component, sigma54 specific, transcriptional regulator, Fis family  41.18 
 
 
477 aa  340  4e-92  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_1522  two component, sigma54 specific, transcriptional regulator, Fis family  39.39 
 
 
461 aa  340  4e-92  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2633  two component, sigma54 specific, transcriptional regulator, Fis family  40.35 
 
 
467 aa  340  4e-92  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_0984  two component, sigma54 specific, Fis family transcriptional regulator  41.76 
 
 
455 aa  339  7e-92  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2694  two component, sigma54 specific, transcriptional regulator, Fis family  39.17 
 
 
461 aa  338  9e-92  Geobacter sp. M21  Bacteria  n/a    hitchhiker  7.62039e-17 
 
 
-
 
NC_009675  Anae109_4257  two component, sigma54 specific, Fis family transcriptional regulator  43.23 
 
 
463 aa  338  9.999999999999999e-92  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_1017  two component, sigma54 specific, transcriptional regulator, Fis family  41.63 
 
 
445 aa  337  1.9999999999999998e-91  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.246569  n/a   
 
 
-
 
NC_010814  Glov_2158  two component, sigma54 specific, transcriptional regulator, Fis family  42.34 
 
 
453 aa  338  1.9999999999999998e-91  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_1951  two component, sigma54 specific, Fis family transcriptional regulator  42.28 
 
 
470 aa  337  1.9999999999999998e-91  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.516267  normal 
 
 
-
 
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