| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_3548 |
|---|
| Symbol | |
|---|
| ID | 5902561 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 3826896 |
|---|
| End bp | 3832724 |
|---|
| Gene Length | 5829 bp |
|---|
| Protein Length | 1942 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641564056 |
|---|
| Product | GAF sensor hybrid histidine kinase |
|---|
| Protein accession | YP_001685173 |
|---|
| Protein GI | 167647510 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCG CCCCCGTTCC CACGCTCGAC AACCATCAAC TCCTGGCGGC CTTGCGGGCC
TTTCGGCGAG GCGACTTCTC GGTTCGCCTG CCGACCGACC TGTCCGGTCT GGACGGCGAG
TTGGCCGAGG CGTTCAACGA CGCGGTCGAT CTCAATGACC GACTGTCCAA GGAATTCGAG
CGCCTGGGCG ATGTCGTCGG CCAGCAGGGC AAGATCACCC AGCGCGCGCG CCTGCCCGGC
GCCACCGGCG CCTGGGCCGC CAGCGTCGAC GCGGTCAACA GCCTGATCAC CGACATGGTG
CACCCCACCG CCGAAATGGC CCGGGTGATC GGCGCGGTGG CCAAGGGCGA CCTGTCGCAG
ACCATGGACC TGGAGAATGA GGACCGCCCC CTGCGCGGCG AGTTCCTGCG CATCGGCAAG
GTCGTCAACA CCATGGTCGG GCAGCTTGGG TCCTTCGCTT CCGAAGTGAC CCGCGTGGCG
CGCGAAGTCG GCACCGAGGG CAAGCTGGGC GGCCAGGCCC AGGTCAAGGG CGTGGCCGGC
ACCTGGAAGG ACCTGACCGA CAACGTCAAC CTGATGGCCG CCAACCTGAC GGGCCAGGTG
CGCAACATCG CCGAGGTCAC CACCGCCGTC GCCAACGGCG ACCTCAGCCG CAAGATCACC
GTCGATGTGA AGGGCGAGGT TCTGGAGCTG AAGAACACCA TCAACACCAT GGTGGACCAG
CTGAACTCCT TCGCTTCGGA AGTGACCCGC GTGGCCCGCG AAGTCGGCAC CGAGGGCAAG
CTGGGCGGTC AGGCCAATGT GCGCGGCGTG GCCGGCACCT GGAAGGACCT GACCGACAAC
GTCAACCTGA TGGCCGCCAA CCTGACCGGT CAGGTGCGCA ACATCGCCGA GGTCACCACC
GCCGTGGCCC GCGGCGACCT GTCCAAGAAG ATCACCGTCG ATGTGCGCGG CGAAATCCTG
GAGCTGAAGG ACACCATCAA CGTCATGGTG GACCAGCTGA ACGCCTTCGC CTCGGAAGTG
ACCCGGGTGG CGCGCGAAGT GGGCACCGAA GGCAAGCTGG GCGGCCAGGC GCGGGTGGAA
GGCGTCGGCG GCACCTGGAA GGACCTGACC GACAACGTCA ACTTCATGGC CGCCAACCTG
ACCGGCCAGG TTCGCAACAT CGCCGAAGTG ACCACCGCCG TGGCCAACGG CGACCTGTCC
AAGAAGATCA CCGTCGACGT GAAGGGCGAG ATCCTCGAGC TGAAGTCGAC CATCAACGTC
ATGGTCGATC AGTTGAACGC CTTCGCCTCG GAAGTGACCC GCGTGGCCCG CGAAGTCGGC
ACCGAAGGCA AGCTGGGCGG CCAGGCCAAC GTCACCGGCG TCGGCGGCAC CTGGAAGGAG
CTGACCGACA ACGTCAACCT GATGGCCGGC AACCTGACCG GCCAAGTGCG CAACATCGCC
GAGGTCACCA CCGCCGTGGC CATGGGCGAC CTGTCCAAGA AGATCACCGT CGACGTGCGC
GGCGAGATCC TTGAGCTGAA GAACACCATC AACACCATGG TCGATCAGCT CAACTCGTTC
TCGTCGGAAG TGACCCGCGT GGCGCGGGAA GTCGGCACCG AGGGCAAGCT GGGCGGCCAG
GCCCAGGTCA AGGGTGTCGG CGGCACCTGG AAGGACCTGA CGGACAACGT CAATTTCATG
GCCGCCAACC TGACAGGCCA GGTCCGCAAC ATCGCCGAAG TGACCACCGC GGTGGCCAAC
GGCGACCTCA GCAAGAAGAT CACCGTCGAC GTGAAGGGCG AGATCCTGGA GCTGAAGAAC
ACCATCAACG TCATGGTCGA TCAGTTGAAC GGCTTCGCCT CGGAAGTGAC CCGCGTGGCG
CGCGAAGTGG GCACCGAGGG CAAGCTGGGC GGCCAGGCCC AGGTCAAGGG CGTGGCCGGC
ACCTGGAAGG AGCTGACCGA CAACGTCAAC CTGATGGCCG GCAACCTGAC CGGCCAGGTC
CGCAACATCG CCGAGGTCAC CACCGCCGTG GCCATGGGCG ACCTGTCCAA GAAGATCACC
GTCGACGTGC GCGGCGAGAT CCTGGAACTG AAGAACACCA TCAACGTCAT GGTGGACCAG
CTGAACTCGT TCTCGTCGGA AGTGACCCGC GTGGCCCGCG AAGTGGGCAC CGAGGGCAAG
CTGGGCGGCC AGGCCCAGGT CAAGGGCGTG GCCGGCACCT GGAAGGACCT CACCGACAAC
GTCAACTTCA TGGCCGCCAA CCTGACCGGC CAGGTCCGCA ACATCGCCGA CGTCACCACC
GCCGTCGCCA AGGGCGACCT GTCCAAGAAG ATCACCGTCG ACGTGCGCGG CGAGATCCTC
GAGCTGAAAT CGACCATCAA CGTCATGGTC GATCAGTTGA ACGGCTTCGC CTCGGAAGTG
ACCCGCGTGG CGCGCGAAGT GGGCACCGAG GGCAAGCTGG GCGGCCAGGC CCAGGTGCCC
GGCGTGGCCG GCACCTGGAA GGACCTGACC GACAACGTCA ACATGATGGC CGCCAACCTG
ACCGGCCAGG TGCGGAACAT CGCCGACGTC GTCACCGCGG TGGCGCAGGG CAACCTGAAG
CGCAAGCTGA CCCTGGACGC CAAGGGTGAG ATCGCCTCGC TGGCCGACAC CATCAACGGC
ATGATCGAGA CCCTGGCCAC CTTCGCCGAC CAGGTGACCA ACGTGGCCCG CGAAGTGGGC
TCGGAAGGCA AGCTGGGCGG CCAGGCCAAG GTGCCCGGCG CCGCTGGCCT GTGGCGCGAC
CTGACCGACA ACGTCAACGA ACTGGCCGCC AACCTGACCA CCCAGGTCCG CGCCATCGCC
GAGGTGTCCA CCGCCGTGAC CAAGGGCGAC CTGACGCGGT CGATCACCGT GGAGGCGTCC
GGCGAAGTCG CGGCCCTGAA GGACAACATC AACGAGATGA TCCGCAATCT GAAGGATCAG
ACGTTGAAGA ACACCGAGCA GGACTGGCTG AAGACCAATC TGGCCCGGTT CAGCCGCATG
CTGCAGGGCG AGCGCGACCT GTCGACCGTG TCCAATCTGG TGCTGTCGGA GCTGGCCCCG
CTGATCAACG CCCAGCACGG GGTGTTCTAC GTCTCCGACC ACGACGTGAA CGGCGAGCCG
GTGCTGAACC TGGCGGCCAA CTACGCCTCC AATCCCGGCG ACAAGCCGCC GTCGCGCCTG
CGCAAGCGCG AAGGGCTGAT CGGCCAGTGC GCGGCCGAGA AGACCCGCAT CCTGCTGACC
GACGTGCCTG CCGACTACGT CAAGATCAGC TCGGGCCTGG GCGAGGCCGC GCCGCAGAGC
ATCATCGTCC TGCCGGCCCT GTTCGAAGGC GAGCTGAAGG CGGTGATCGA GCTGGCCACG
TTCGGCAAGT TCAACGAGAC CCAGCAGGCC TTCCTCGACC AGCTGATGGA ATCCATCGGC
ATCGTGCTGT CGACCATCGC CGCCAACATG CGAACCGAGG GACTGCTCGA ACAGTCGCAG
CTGCTGACGT CTGAACTGCA GGCCCAGCAA GGCGAACTGA AGAAGACCAA CGACCGCCTG
GAGCTGCAGG CCGCGTCCCT GCGCCAGTCC GAGGAACTGC TACGCTCCAA GCAGGACGAG
CTCCAGCAGA CCAACGCCGA GCTCGAAGAC AAGGCCATGC TGCTGTCGGC TCAGAACAAG
CAGGTGGAAG CCAAGAACAC CGAGGTCGAG CAGGCCAAGG CGGCGCTGGA GGAAAAGGCC
GAACAGCTGG CCCTGACCTC CAAGTACAAG TCCGAGTTCC TGGCCAATAT GAGCCACGAG
CTGCGCACGC CGCTCAACAG CCTGCTGATC CTGTCCAAGA TGCTCAGCGA GAACGCCCAG
GGCAATCTGA GCGACAAGCA GGTGGAGTTC TCCAAGAACA TCCACAGCGC CGGCACCGAC
CTGCTGGGGC TGATCAACGA CATCCTCGAC CTGTCGAAGA TCGAGAGCGG CACGGTCACC
CTCGACATCG GCGAGATGGC CTTCACCTCC CTGCGCGACC AGACCCAGCG GACCTTCGCC
CAACTGGCCC AGGACAAGAA GATCGACTTC CAGATCGACA TCGACCCGGC CCTGCCGCGA
TCGATGTATA CCGACGACAA GCGCCTGCAG CAGGTGATCA AGAACCTGCT GTCCAACGCC
TTCAAGTTCA CCCAGGTCGG GTCGGTGCGC CTGTCGGTCA GCCGGGCCGA AAGCGGTTGG
GCCAGCGGCA ACGACCACCT CAACAAGGCG GGCCAGGTGC TGGCCTTCTC GGTCGAGGAC
ACCGGCATCG GCATCCCCGA GGACAAGCAG CGGATCATCT TCGAGGCCTT CCAGCAGGCC
GACGGCACCA CCAGCCGCAA GTACGGGGGC ACGGGCCTTG GCCTGTCCAT CAGCCGCGAG
ATCACCCGGC TGCTCGGCGG CGAGCTGAAG GTGGTGTCCA TTCCGGGTTC GGGCAGCACC
TTCACTCTCT ACCTGCCGCT CAACTTCAGC CCGGCGGCCC AGCCCCTGCC GGCGCCGCGC
CAGCCCAGCG CGCCCTCGTC CACCTTCACC TTCTCCACGG CCGACGCGCC CTCCTACGAG
CGGCCGGAAA CCGTGATCGA CGACCGCGAG CAGATCGAGC CGGGCGAGCC CGTCGTGCTG
ATCGTCGAGG ACGACCCGCG CTTCGCCTCG ATCCTGCTGT CCCTGGTGCG CGACAACGGC
TTCAAGGGCG TGGTCACCGG CGAGGGCTCG GCCGTGCCGT CCCTGGCCCG CCGCTTCAAG
CCCGAGGCCA TATTGCTCGA TGTCGGCCTG CCCGACATGG ACGGTCTGGC CCTGCTGGAC
CTGCTCAAGC GCACCCCCGA CACCCGCCAC ATCCCCGTGC AGGTGATCTC GGCCGACGAC
CGCGGCGGCC TCAGCCTGTC GATGGGCGCC CTGGGCTTCA CCTCCAAGCC GGTGGAGCAG
GAATCCCTGG TCTCGACCCT CGACCGCGTC AAGCGCCTGA CCCACGGCGC CGAGCGCACG
CCCCTGCTGA TCGGCGGCGA AGGCGAAGTC GCCGGTATGC TGCGCGCGGC GTTCAAGACC
ATCCGCCTGC AACCGACGCT GGACGACCTG CCCGACTCCG CCTTCACCGG CGAGGATGGT
TGCCTGGTGG TCGATGTCGG CGGCGGGCCG GTGGGTGCGA TCCTCGACGT GCTGAAGTCG
CGCGGCGCGG CCTCGGGGAC GGTGGTGCTC TACGCCTCCC GCGACCTCGG CGCCGAGGAC
GACCGCCGCC TTCGCCTGGC GGTCTTCAGC GGCCTGGCCC GTCTGGCCCG CACGCCGGAA
CAGCTGGTCG ACCATGTCGC CCTCCTGCTG CACCAGCCCG TCGATCGTCT GTCGGCCGCC
ACTCGCGCCA TGCTGGTCCA GAGCCGCCAC GCCGACGCGG TCCTGGCCGG TCGCACCGCC
GTGGTCATCG ACGACGACAT CCGCAACATC TTCTCCCTGG CCAGCGCGCT GGAGGAATAC
GGCATCGAAC TTCGCTACGC CGAAAGCGGT CGCGCGGGTC TGGAGCTGCT CGACAGCATG
CCCTCGGCCG ACATGGTGCT GGTCGACATC ATGATGCCCG ACATGGACGG CTACGAGACC
ATCCGCGAGA TCCGCGCCCG TGATCGCTTC GCGGATCTGC CGGTGATCGC CGTCACCGCC
AAGGCCATGA AGGGCGACCG GCAGAAGTGC ATCCAGGCGG GGGCTTCAGA CTATGTCTCC
AAGCCGGTCG ATCTGGACCA GCTGATCTCG GTGTTGCGGG TTTCGGTGCA ACGGTCCGAC
GCCCACCGCC TGGCCGGCGA CAACGTCGCG ACCCTCTCCA GCCCGGCCCT GTCCAGCGTT
GTTCAGTGA
|
|---|
| Protein sequence | MSAAPVPTLD NHQLLAALRA FRRGDFSVRL PTDLSGLDGE LAEAFNDAVD LNDRLSKEFE
RLGDVVGQQG KITQRARLPG ATGAWAASVD AVNSLITDMV HPTAEMARVI GAVAKGDLSQ
TMDLENEDRP LRGEFLRIGK VVNTMVGQLG SFASEVTRVA REVGTEGKLG GQAQVKGVAG
TWKDLTDNVN LMAANLTGQV RNIAEVTTAV ANGDLSRKIT VDVKGEVLEL KNTINTMVDQ
LNSFASEVTR VAREVGTEGK LGGQANVRGV AGTWKDLTDN VNLMAANLTG QVRNIAEVTT
AVARGDLSKK ITVDVRGEIL ELKDTINVMV DQLNAFASEV TRVAREVGTE GKLGGQARVE
GVGGTWKDLT DNVNFMAANL TGQVRNIAEV TTAVANGDLS KKITVDVKGE ILELKSTINV
MVDQLNAFAS EVTRVAREVG TEGKLGGQAN VTGVGGTWKE LTDNVNLMAG NLTGQVRNIA
EVTTAVAMGD LSKKITVDVR GEILELKNTI NTMVDQLNSF SSEVTRVARE VGTEGKLGGQ
AQVKGVGGTW KDLTDNVNFM AANLTGQVRN IAEVTTAVAN GDLSKKITVD VKGEILELKN
TINVMVDQLN GFASEVTRVA REVGTEGKLG GQAQVKGVAG TWKELTDNVN LMAGNLTGQV
RNIAEVTTAV AMGDLSKKIT VDVRGEILEL KNTINVMVDQ LNSFSSEVTR VAREVGTEGK
LGGQAQVKGV AGTWKDLTDN VNFMAANLTG QVRNIADVTT AVAKGDLSKK ITVDVRGEIL
ELKSTINVMV DQLNGFASEV TRVAREVGTE GKLGGQAQVP GVAGTWKDLT DNVNMMAANL
TGQVRNIADV VTAVAQGNLK RKLTLDAKGE IASLADTING MIETLATFAD QVTNVAREVG
SEGKLGGQAK VPGAAGLWRD LTDNVNELAA NLTTQVRAIA EVSTAVTKGD LTRSITVEAS
GEVAALKDNI NEMIRNLKDQ TLKNTEQDWL KTNLARFSRM LQGERDLSTV SNLVLSELAP
LINAQHGVFY VSDHDVNGEP VLNLAANYAS NPGDKPPSRL RKREGLIGQC AAEKTRILLT
DVPADYVKIS SGLGEAAPQS IIVLPALFEG ELKAVIELAT FGKFNETQQA FLDQLMESIG
IVLSTIAANM RTEGLLEQSQ LLTSELQAQQ GELKKTNDRL ELQAASLRQS EELLRSKQDE
LQQTNAELED KAMLLSAQNK QVEAKNTEVE QAKAALEEKA EQLALTSKYK SEFLANMSHE
LRTPLNSLLI LSKMLSENAQ GNLSDKQVEF SKNIHSAGTD LLGLINDILD LSKIESGTVT
LDIGEMAFTS LRDQTQRTFA QLAQDKKIDF QIDIDPALPR SMYTDDKRLQ QVIKNLLSNA
FKFTQVGSVR LSVSRAESGW ASGNDHLNKA GQVLAFSVED TGIGIPEDKQ RIIFEAFQQA
DGTTSRKYGG TGLGLSISRE ITRLLGGELK VVSIPGSGST FTLYLPLNFS PAAQPLPAPR
QPSAPSSTFT FSTADAPSYE RPETVIDDRE QIEPGEPVVL IVEDDPRFAS ILLSLVRDNG
FKGVVTGEGS AVPSLARRFK PEAILLDVGL PDMDGLALLD LLKRTPDTRH IPVQVISADD
RGGLSLSMGA LGFTSKPVEQ ESLVSTLDRV KRLTHGAERT PLLIGGEGEV AGMLRAAFKT
IRLQPTLDDL PDSAFTGEDG CLVVDVGGGP VGAILDVLKS RGAASGTVVL YASRDLGAED
DRRLRLAVFS GLARLARTPE QLVDHVALLL HQPVDRLSAA TRAMLVQSRH ADAVLAGRTA
VVIDDDIRNI FSLASALEEY GIELRYAESG RAGLELLDSM PSADMVLVDI MMPDMDGYET
IREIRARDRF ADLPVIAVTA KAMKGDRQKC IQAGASDYVS KPVDLDQLIS VLRVSVQRSD
AHRLAGDNVA TLSSPALSSV VQ
|
|---|
| |