| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1956 |
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| Symbol | |
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| ID | 4015400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 2022508 |
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| End bp | 2023179 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637941624 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_548785 |
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| Protein GI | 91787833 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000121146 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.806146 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCCTGT TACTGATCGA GGACGATGCC GCGCTGCGGC TCACACTGGC CCGCCAGCTG
GAGGCCGATG GCTACCGGGT CGACCAGGCC AAGGACGGCG AAGAGGGCCT GTTCCTGGCG
CGCGAGTACC CGGTCGACCT GGTCATCGTC GACCTGGGGC TGCCCAAGCT GAACGGGCTG
ACCATCGTGC AGCGCCTGCG CCAGGAGGGG CGTGCCATAC CCATCCTGAT CCTCACCGCA
CGCGGCAGCT GGCAAGACAA GGTTGTGGGG CTGGAGGCCG GGGCCGACGA CTACCTGGTC
AAGCCTTTCG AATACCCGGA GCTGGCGGCG CGGCTCAAGG CCTTGTTGCG GCGCTCGCTC
AAGACTGCCT CTGACGTGCT GACGCTCGGC CCCCTCAGCA TTGACCTGTC GGCGCAGGCG
GCGCGGCTCA ATGGCGCGGC GTTGGAGCTC ACGGCGTTCG AGTACCGCCT GCTCGAGTAT
CTGGTGCGCC AGCGCCCGGG CATCGTCACC AAGCAGGCGC TGTCGGACTA CCTGTACCCG
CACGGGGAAG ACCGCGACAG CAACGTGCTG GAGGTGCTGG TGGGTCGGCT GCGGCGCAAG
CTCGACCCGG ACGGCAGCCT CGGCCCGATC GAGACCGTGC GAGGGCGTGG CTACCGGTTC
ACCCTGGAAT GA
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| Protein sequence | MRLLLIEDDA ALRLTLARQL EADGYRVDQA KDGEEGLFLA REYPVDLVIV DLGLPKLNGL
TIVQRLRQEG RAIPILILTA RGSWQDKVVG LEAGADDYLV KPFEYPELAA RLKALLRRSL
KTASDVLTLG PLSIDLSAQA ARLNGAALEL TAFEYRLLEY LVRQRPGIVT KQALSDYLYP
HGEDRDSNVL EVLVGRLRRK LDPDGSLGPI ETVRGRGYRF TLE
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