| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_0107 |
|---|
| Symbol | |
|---|
| ID | 6367464 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | - |
|---|
| Start bp | 103081 |
|---|
| End bp | 105405 |
|---|
| Gene Length | 2325 bp |
|---|
| Protein Length | 774 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642675507 |
|---|
| Product | PAS/PAC sensor hybrid histidine kinase |
|---|
| Protein accession | YP_001950364 |
|---|
| Protein GI | 189423187 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGAAG AGAAGCTGCG GCTCTTTGTC GAATATGCGC CGGCAGCCCT GGCCATGTTT
GATCGTGAGA TGCGTTACCT GTATGTCAGC CGCCGCTGGC TGACTGACTA CCGGCTGGGT
GACCGGGACC TGCGGGGCCT GTCGCACTAT GATGTCTTTC CTGAAATCCA GCAGCGCTGG
AAAGAGCTGC ATAGCCGCTG TCTTGCAGGA GAGTCCCTGT CTGCAGACTC AGACCGTTTT
GTGCGTGCTG ACGGCACCGT CCAGTGGTTG CGCTGGGAAA TCCGGCCCTG GTTCGTCACC
CCTGACGAGA TTGGCGGTAT CGTTATTTTT TCCGAGGATA TCACCAAGCT CAAGCAGGCT
GAAGATGTCC TGCGGCGTTA TGAGCTGCTC TCCAAGTACA GCCGCGACAT CGCCCTGTTT
ATCCGGCGGG GCGACGGCCG CATCCTGGAG GCGAATGATG CGGCTGTCAG GACCTACGGC
TACAGCCATG ATGAGCTGCT GGGCATGACG ATATATGACC TCAGGACGCC GGATTGTGCA
GCACCTGCAC CTGCCCAGAT GGAGGAGGCA GACACCCACG GGATCCTCTT TGAGACCGTA
CACCGCACCA AAGAGGGCAG GGCATTTCCG GTGGAGGTCA GCTCCTGCGG TGTTGATATC
GGTGATGACC GGATCCTGCT CAGCCTGGTC CGGGAGATCA GCAAGCGCAA GGAAGCCGAA
GCGGAGCTGA AAAGAAATGC CGAAGTTGAG CATGCCCGCC TGGCTGAGCT GGAGGCGTTG
ATGCAGGCAG TTCCGGCCGC CGTTCTGATC AGCCATGACC CGCACTGTCA CGTCATCACC
GGCAACCATG CCGCCTACGA GCTGCTGCGG ATGGAGTACG GCAGCAATAC CTCAAAAAGC
AATCCTGATG CCAAGACCAG TCATTTCAAG GTGTTGCACC AGGGCAAGGA GCTGTCCGTT
GCGGAATTAC CGCTGCAACA GGCGATAGCA ACCGGGATGC CGGTCTGCAA CTTTGAAGAA
GAGATCCTCT TCGACAACGG AGACTGCGTC TCGGTCTACG GCAATGCCGT GCCGTTAAGG
GATGCCAGCG GCAGCATAAC CGGTGTGGTA GCCGCCTTTG TCGACATCGG CCAGCTGGTG
CAGGCACAGG AAGAGGCCAG ACAGGCCAGA CTGGCTGCCG AGGCAGCCAA CCGTGCCAAA
AGCGCGTTTC TGGCCAACAT GAGCCACGAA ATCCGCACCC CCCTCAACGG CATCGTCGGC
ACGGCACAGC TGCTTGAGTT TACCCGCTTG ACCGGTGAAC AGAAGGACTA CCTGGCCGAT
ATCAAATCAT CCTCCAGCAC CTTGCTGTCG CTGCTGAATG ATGTGCTTGA TCTCTCCAAG
ATCGAAGCCG GCAAGATCAC GCTTGAGTCT TTGGACTTCA GGCTGCGTGC GAGTATTGAC
GGCGTTATCA AATCGCTGAA ATCACTGGCA CAGTCCAAGG GCCTGCAGAT AGAGCTGCAG
ATCCCGGACA GTGTGCCGGA TTGCCTGAAA GGCGACCAGA CCCGTTTCAA GCAGATACTG
CTCAACCTGC TCGGCAATGC GGTCAAATTT ACGGAGACGG GCGGCATTAC CGTATCGGTG
AGGCTGAAAG AGCAGCACAA CGACCAGTTG CTACTTGAGA TCGATGTCAA GGATACCGGC
ATCGGGATCT CTCCCCAGAT GCTTGAAATG ATTTTTGAAC CGTTTACCCA GGCAGAAACC
TCCCTGACCA AAAAATACGG CGGCACCGGC CTGGGCCTGG CAATCTGCAA ACGGCTGGTC
ACCATGATGG GCGGGCAGTT GTGGGCCGAG AGCGTTGCAG GGGGTGGCAG CACCTTCCAT
CTGGCAGCAC CGTTTTCCCT CTGCACGCAG CAAGACGCGG AATGTCCGCT TGACGCGCCT
CCGCCGGCCG CAACGGAATG GGATGGCCCT CCACTGCGCA TCCTGCTTGC CGATGACCAT
GAGATCAACC TGAAGTTCAC CAGCAGGCTG CTGGAAAAAT TCGGCCATAC GGTCGTTCAG
GCCCGTGACG GCCAGGAGGC CCTGCAACTG TGGGAACAGC ACGACTTTGA CCTGATTCTG
ATGGACGTGA GCATGCCGGT CGTAAGCGGC ATCGAGGCGG TCGGGGTGAT CCGGCAGAAG
GAGCGGGACA CACACAGGCA TCTGCCGATC ATTGCCCTGA CCGGGCATGC CTCGGTGCAG
ATCAAGGAAC AGGTGGCACA CCAGGGGTTT GACGGCTGCC TGATCAAACC GATCCCCCTT
GAGGTCCTGC TGCAGGAACT CAAGCGGCAT CTTCCGGGCT GCTGA
|
|---|
| Protein sequence | MNEEKLRLFV EYAPAALAMF DREMRYLYVS RRWLTDYRLG DRDLRGLSHY DVFPEIQQRW
KELHSRCLAG ESLSADSDRF VRADGTVQWL RWEIRPWFVT PDEIGGIVIF SEDITKLKQA
EDVLRRYELL SKYSRDIALF IRRGDGRILE ANDAAVRTYG YSHDELLGMT IYDLRTPDCA
APAPAQMEEA DTHGILFETV HRTKEGRAFP VEVSSCGVDI GDDRILLSLV REISKRKEAE
AELKRNAEVE HARLAELEAL MQAVPAAVLI SHDPHCHVIT GNHAAYELLR MEYGSNTSKS
NPDAKTSHFK VLHQGKELSV AELPLQQAIA TGMPVCNFEE EILFDNGDCV SVYGNAVPLR
DASGSITGVV AAFVDIGQLV QAQEEARQAR LAAEAANRAK SAFLANMSHE IRTPLNGIVG
TAQLLEFTRL TGEQKDYLAD IKSSSSTLLS LLNDVLDLSK IEAGKITLES LDFRLRASID
GVIKSLKSLA QSKGLQIELQ IPDSVPDCLK GDQTRFKQIL LNLLGNAVKF TETGGITVSV
RLKEQHNDQL LLEIDVKDTG IGISPQMLEM IFEPFTQAET SLTKKYGGTG LGLAICKRLV
TMMGGQLWAE SVAGGGSTFH LAAPFSLCTQ QDAECPLDAP PPAATEWDGP PLRILLADDH
EINLKFTSRL LEKFGHTVVQ ARDGQEALQL WEQHDFDLIL MDVSMPVVSG IEAVGVIRQK
ERDTHRHLPI IALTGHASVQ IKEQVAHQGF DGCLIKPIPL EVLLQELKRH LPGC
|
|---|
| |