| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6237 |
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| Symbol | |
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| ID | 6277935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2488086 |
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| End bp | 2490251 |
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| Gene Length | 2166 bp |
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| Protein Length | 721 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642617292 |
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| Product | integral membrane sensor hybrid histidine kinase |
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| Protein accession | YP_001889935 |
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| Protein GI | 187920903 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.703753 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCACA ACCTGTTCGA CGCATGGTGG AGTTTGATCG GCAGCTTCAG GAGCAGCCTT
GTATCGCGGC TTCTCGTGAC CGTGCTGCTG GTCAGTTGCG TCGTCACCGT GTTGTTGACC
GGATTGCAGC TTTACGGCGA CTACTACCGG GGCGTGGAGC AGATTGAAAA TCGCCTGACG
GACATCGACC GCAGCAATCG CGACAGTCTC GCGGAGGCGC TCTGGCGCCT CGACGGTTCG
CAACTGCGAC TTGAGTTGAA CGGCATTCTG CGTCTTGCCG ACATTCGTGC CGTGGAAATT
CGCGAGACAG GCAAAGAGGG GCAATCGGCC TATGTGAGTG CCGGGCGGCG CTCGGCCGGT
CCCGTCATCG CCCGCGAATT CCCGCTCTCC TACAGCGTGC AGGGCAAGGA GCGCGAGATC
GGCAAGCTCT ACGTCGAGGC GACGCTGCTC GACCTTTATC ATGACCTGAC GCGTACCGCG
GTGATGATCC TCGTCACTCA GGCCGCCAAC ACCTTTCTGA TCTCGCTGTT CATCGTCTAC
ATTCTGTCCC GTCTCGTGAT GCGGCATGTC GCCGCCATCG CGCGCACGGT GGAGAGCTAC
GATTTCCGTG AACCGCCCCG GCCGTTCAGT CTCCAGCGGT GCAAACGGCG CGAGCCGGAC
GAACTGGATC GCGTGGCGGC CGCATTCAAT GCGATGGGCG CGCGGCTGTA CTGCGCGTAC
CGCGACGAGC AGGACACGGC GGCCGAACGC GAAGCACGCA ATCTGGCGGA AGCGGCCAAC
CGGGCCAAAG GCGAATTCCT GGCGAACATG AGTCATGAGC TGCGCACGCC GCTCAATGGC
ATTCTCGGCT ACGCCCAGAT CCTCGAACGC GATGCCGCAT TGAGCGAGCG GCAGCGCGAA
CGCGCGTCGT CCATCCGCCA TAGTGGCGAA CATCTGCTGA CACTGATCGA AGACACGCTC
GATTTCGCGA GGATCGAAGC GGGCAAGCTG CGTGTGGAAA TCGGCGACGT GCCGCTGGCG
GGGTTCGTCG ATGTCATTCG CGACATCATC GACGTGAAAG CGGAGCAGAA GCGCCTCGAC
TTCATCTGCG AAATCACTGG GGATGCCCCC GTCGGCGTGC GTGCCGATGA GCGGCGCCTG
CGGCAGGTCA TGCTCAACCT GCTTGCCAAC GCCGTGAAGT TCACCGATTC GGGTTGCGTC
ACCCTGCATA TCTCGAGGTC CGAGTCGAAC CGCGTTCGTT TCGAAGTGCG CGACACGGGG
ATCGGCATTG GTCACGATCA GTTGAATACG ATCTTCGAGC CGTTCGAGCA GCTGGGCGCG
GCCGAGCGGC GAGCCGGCGG GGCGGGTCTC GGTCTGGCCA TCAGCCGCGA ATTCGTGCGT
GCGATGGGTG GCGAGATCGA GGTGGAAAGC CGGATCGGGC AGGGCAGTAC TTTCCGCTTC
GAACTGCCGG CAGCGAGCGT GACGCCCGTG TTGCGCAAGA CGGCGGTCCC GGCGCCGCTG
TCGTCCACGG CGACGGGCTA TGAAGGGCCG CGCAGGAAGG TGCTGGTTGT CGACGATGTC
GAGATCAATC GCGCGATCGT CGTGGATCTG CTGGGGCGTC TCGGCTTCGA TACCGTCGAG
GCGGAAAACG GTCGCGAGGC ATTGGAGAAG GCGCAGCGCG AACGGCCGGC GCTGATTCTC
ACGGACATCG TGATGCCCGA GATGAACGGC TTCGACCTGA CGCGTAACCT GCGTCGATCG
CAAGCGTTCG CCGATGTTCC CATCGTGGCC ATGTCCGCCA GCCCATCCGG GGTCAACCGG
GCGATGAGCA TCGAGGCGGG CGCCAATGCC TTTCTGTCCA AACCGGTCGA CCTCGAAGCG
CTGCTGACAC AGATTGCTAC GTTGCTCGGG CTGAAGTGGA CCCATGCGTC GCCGCCCCCA
TTCACTCGCG CGGCGACTCC CGAAATCGGT CTTGCGGCCG TGCCTCGGCA ACAGATGGAA
GAACTGCATC ATCTTGCCCG CCTTGGCGAC ATGCATGAGA TTATCGTCTG GGCCGAGAGC
GTGGCGGCGG GCGATTCACG TTATCGCTCG TTCACCACGC AACTCTGCGC GCTCGCTCGC
GACTACCAGT CGAAAGCCAT TCTCCATCTG GTTGAGCGAC ATCTGAATGT CGAGCCCAAG
CCATGA
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| Protein sequence | MKHNLFDAWW SLIGSFRSSL VSRLLVTVLL VSCVVTVLLT GLQLYGDYYR GVEQIENRLT
DIDRSNRDSL AEALWRLDGS QLRLELNGIL RLADIRAVEI RETGKEGQSA YVSAGRRSAG
PVIAREFPLS YSVQGKEREI GKLYVEATLL DLYHDLTRTA VMILVTQAAN TFLISLFIVY
ILSRLVMRHV AAIARTVESY DFREPPRPFS LQRCKRREPD ELDRVAAAFN AMGARLYCAY
RDEQDTAAER EARNLAEAAN RAKGEFLANM SHELRTPLNG ILGYAQILER DAALSERQRE
RASSIRHSGE HLLTLIEDTL DFARIEAGKL RVEIGDVPLA GFVDVIRDII DVKAEQKRLD
FICEITGDAP VGVRADERRL RQVMLNLLAN AVKFTDSGCV TLHISRSESN RVRFEVRDTG
IGIGHDQLNT IFEPFEQLGA AERRAGGAGL GLAISREFVR AMGGEIEVES RIGQGSTFRF
ELPAASVTPV LRKTAVPAPL SSTATGYEGP RRKVLVVDDV EINRAIVVDL LGRLGFDTVE
AENGREALEK AQRERPALIL TDIVMPEMNG FDLTRNLRRS QAFADVPIVA MSASPSGVNR
AMSIEAGANA FLSKPVDLEA LLTQIATLLG LKWTHASPPP FTRAATPEIG LAAVPRQQME
ELHHLARLGD MHEIIVWAES VAAGDSRYRS FTTQLCALAR DYQSKAILHL VERHLNVEPK
P
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