More than 300 homologs were found in PanDaTox collection
for query gene Krad_3404 on replicon NC_009664
Organism: Kineococcus radiotolerans SRS30216



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009664  Krad_3404  methyl-accepting chemotaxis sensory transducer  100 
 
 
317 aa  606  9.999999999999999e-173  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.507139  normal  0.337422 
 
 
-
 
NC_007778  RPB_1313  methyl-accepting chemotaxis sensory transducer  36.66 
 
 
434 aa  148  1.0000000000000001e-34  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.204182 
 
 
-
 
NC_013521  Sked_05490  methyl-accepting chemotaxis protein  39.18 
 
 
314 aa  148  1.0000000000000001e-34  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_2232  methyl-accepting chemotaxis sensory transducer  35.34 
 
 
307 aa  144  2e-33  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.383652 
 
 
-
 
NC_007643  Rru_A3465  methyl-accepting chemotaxis sensory transducer  36.43 
 
 
419 aa  142  9.999999999999999e-33  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.61828  n/a   
 
 
-
 
NC_007958  RPD_3907  chemotaxis sensory transducer  35.44 
 
 
424 aa  139  6e-32  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.827608 
 
 
-
 
NC_011004  Rpal_4791  methyl-accepting chemotaxis sensory transducer  36.91 
 
 
434 aa  139  7e-32  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4682  methyl-accepting chemotaxis sensory transducer  36.39 
 
 
441 aa  132  6e-30  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_1394  chemotaxis sensory transducer  36.3 
 
 
444 aa  132  7.999999999999999e-30  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1414  methyl-accepting chemotaxis sensory transducer  37.29 
 
 
440 aa  130  3e-29  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0801097  normal 
 
 
-
 
NC_011004  Rpal_4976  methyl-accepting chemotaxis sensory transducer  35.78 
 
 
440 aa  129  1.0000000000000001e-28  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.350417  n/a   
 
 
-
 
NC_007925  RPC_4661  methyl-accepting chemotaxis sensory transducer  36.75 
 
 
440 aa  125  6e-28  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.224598 
 
 
-
 
NC_011004  Rpal_4974  methyl-accepting chemotaxis sensory transducer  36.36 
 
 
440 aa  125  1e-27  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.178259  n/a   
 
 
-
 
NC_007778  RPB_1072  methyl-accepting chemotaxis sensory transducer  34.33 
 
 
411 aa  120  1.9999999999999998e-26  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A3563  chemotaxis sensory transducer  39.09 
 
 
563 aa  120  3e-26  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_03110  methyl-accepting chemotaxis protein  46.63 
 
 
347 aa  119  7.999999999999999e-26  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0123169  normal 
 
 
-
 
NC_009664  Krad_1613  methyl-accepting chemotaxis sensory transducer  53.52 
 
 
523 aa  119  7.999999999999999e-26  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.00385179  normal 
 
 
-
 
NC_011757  Mchl_2346  methyl-accepting chemotaxis sensory transducer  41.94 
 
 
556 aa  119  7.999999999999999e-26  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.395485 
 
 
-
 
NC_009485  BBta_1840  methyl-accepting chemotaxis sensory transducer  44.08 
 
 
561 aa  117  1.9999999999999998e-25  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.745103 
 
 
-
 
NC_014148  Plim_1909  chemotaxis sensory transducer  47.18 
 
 
965 aa  117  1.9999999999999998e-25  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.11776  n/a   
 
 
-
 
NC_010172  Mext_2072  chemotaxis sensory transducer  41.47 
 
 
556 aa  118  1.9999999999999998e-25  Methylobacterium extorquens PA1  Bacteria  normal  0.68132  normal  0.341201 
 
 
-
 
NC_008009  Acid345_1526  methyl-accepting chemotaxis sensory transducer  47.95 
 
 
858 aa  117  1.9999999999999998e-25  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.787952  normal  0.35844 
 
 
-
 
NC_010730  SYO3AOP1_0921  methyl-accepting chemotaxis sensory transducer  30.8 
 
 
483 aa  116  3.9999999999999997e-25  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_2984  chemotaxis sensory transducer  50 
 
 
545 aa  116  5e-25  Nocardioides sp. JS614  Bacteria  normal  0.660626  n/a   
 
 
-
 
NC_010511  M446_4388  methyl-accepting chemotaxis sensory transducer  48.03 
 
 
553 aa  116  6e-25  Methylobacterium sp. 4-46  Bacteria  normal  0.789001  normal 
 
 
-
 
NC_009485  BBta_6993  putative methyl-accepting chemotaxis receptor/sensory transducer  48.3 
 
 
697 aa  115  1.0000000000000001e-24  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1317  methyl-accepting chemotaxis sensory transducer  44.59 
 
 
560 aa  115  1.0000000000000001e-24  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.14669 
 
 
-
 
NC_009485  BBta_2843  putative histidine kinase, HAMP region  47.06 
 
 
682 aa  114  2.0000000000000002e-24  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010510  Mrad2831_5878  methyl-accepting chemotaxis sensory transducer  50 
 
 
562 aa  114  2.0000000000000002e-24  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.338132 
 
 
-
 
NC_011004  Rpal_4118  methyl-accepting chemotaxis sensory transducer  45.21 
 
 
567 aa  114  2.0000000000000002e-24  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_4818  methyl-accepting chemotaxis sensory transducer  56.52 
 
 
252 aa  114  2.0000000000000002e-24  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4787  methyl-accepting chemotaxis sensory transducer  43.95 
 
 
561 aa  114  3e-24  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.708956  n/a   
 
 
-
 
NC_013093  Amir_0199  methyl-accepting chemotaxis sensory transducer  39.54 
 
 
532 aa  114  3e-24  Actinosynnema mirum DSM 43827  Bacteria  normal  0.570256  n/a   
 
 
-
 
NC_009485  BBta_4269  putative methyl-accepting chemotaxis receptor/sensory transducer protein  46.48 
 
 
691 aa  114  3e-24  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.35374 
 
 
-
 
NC_010505  Mrad2831_2241  methyl-accepting chemotaxis sensory transducer  39.44 
 
 
566 aa  114  3e-24  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_30960  methyl-accepting chemotaxis protein  49.65 
 
 
540 aa  113  3e-24  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2197  methyl-accepting chemotaxis sensory transducer  51.91 
 
 
522 aa  113  5e-24  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_2555  chemotaxis sensory transducer  49.65 
 
 
561 aa  113  5e-24  Methylobacterium extorquens PA1  Bacteria  normal  0.834906  normal 
 
 
-
 
NC_011004  Rpal_5172  methyl-accepting chemotaxis sensory transducer  48.63 
 
 
656 aa  113  5e-24  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3161  methyl-accepting chemotaxis sensory transducer  47.89 
 
 
731 aa  112  6e-24  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.072786  normal 
 
 
-
 
NC_007958  RPD_3904  chemotaxis sensory transducer  36.32 
 
 
566 aa  112  6e-24  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_2757  methyl-accepting chemotaxis sensory transducer  41.99 
 
 
561 aa  112  7.000000000000001e-24  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0630329  n/a   
 
 
-
 
NC_008312  Tery_4229  methyl-accepting chemotaxis sensory transducer  32.99 
 
 
1150 aa  112  7.000000000000001e-24  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.591053 
 
 
-
 
NC_007778  RPB_1316  methyl-accepting chemotaxis sensory transducer  45.07 
 
 
561 aa  112  8.000000000000001e-24  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.234166 
 
 
-
 
NC_013093  Amir_3089  methyl-accepting chemotaxis sensory transducer  49.32 
 
 
526 aa  112  8.000000000000001e-24  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_7375  methyl-accepting chemotaxis sensory transducer  48.59 
 
 
655 aa  112  8.000000000000001e-24  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_2471  methyl-accepting chemotaxis sensory transducer  39.83 
 
 
718 aa  112  9e-24  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0242034  normal 
 
 
-
 
NC_007406  Nwi_2996  methyl-accepting chemotaxis protein  44.97 
 
 
698 aa  112  1.0000000000000001e-23  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_3471  methyl-accepting chemotaxis sensory transducer  41.09 
 
 
561 aa  110  2.0000000000000002e-23  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.130295  normal 
 
 
-
 
NC_009664  Krad_2095  methyl-accepting chemotaxis sensory transducer  50.7 
 
 
538 aa  110  2.0000000000000002e-23  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4064  methyl-accepting chemotaxis sensory transducer  46.62 
 
 
651 aa  110  2.0000000000000002e-23  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_3951  hypothetical protein  43.84 
 
 
420 aa  111  2.0000000000000002e-23  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.131979  normal  0.604734 
 
 
-
 
NC_007778  RPB_3610  methyl-accepting chemotaxis sensory transducer  46.48 
 
 
563 aa  111  2.0000000000000002e-23  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.735593  normal  0.400148 
 
 
-
 
NC_011757  Mchl_3733  methyl-accepting chemotaxis sensory transducer  40.69 
 
 
558 aa  110  2.0000000000000002e-23  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.152196  normal 
 
 
-
 
NC_013757  Gobs_5010  methyl-accepting chemotaxis sensory transducer  54.78 
 
 
538 aa  111  2.0000000000000002e-23  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_2149  methyl-accepting chemotaxis sensory transducer  44.52 
 
 
675 aa  110  2.0000000000000002e-23  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.0391093 
 
 
-
 
NC_010172  Mext_3424  chemotaxis sensory transducer  40.69 
 
 
558 aa  110  2.0000000000000002e-23  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.574813 
 
 
-
 
NC_009707  JJD26997_0539  methyl-accepting chemotaxis protein  29.74 
 
 
459 aa  110  2.0000000000000002e-23  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_3147  chemotaxis sensory transducer  41.09 
 
 
561 aa  110  2.0000000000000002e-23  Methylobacterium extorquens PA1  Bacteria  normal  0.0908078  normal 
 
 
-
 
NC_010505  Mrad2831_0387  methyl-accepting chemotaxis sensory transducer  51.41 
 
 
565 aa  111  2.0000000000000002e-23  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_1918  chemotaxis sensory transducer  40.19 
 
 
688 aa  110  2.0000000000000002e-23  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.537222 
 
 
-
 
NC_013521  Sked_32360  methyl-accepting chemotaxis protein  47.89 
 
 
530 aa  110  3e-23  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_2738  methyl-accepting chemotaxis sensory transducer  50.38 
 
 
562 aa  110  3e-23  Methylobacterium sp. 4-46  Bacteria  normal  0.809654  normal  0.020868 
 
 
-
 
NC_009485  BBta_4464  methyl-accepting chemotaxis sensory transducer  46.48 
 
 
573 aa  110  3e-23  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.610641  normal  0.757777 
 
 
-
 
NC_010725  Mpop_2047  methyl-accepting chemotaxis sensory transducer  53.44 
 
 
562 aa  110  4.0000000000000004e-23  Methylobacterium populi BJ001  Bacteria  normal  normal  0.759486 
 
 
-
 
NC_007643  Rru_A3665  chemotaxis sensory transducer  41.26 
 
 
567 aa  110  4.0000000000000004e-23  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_27420  methyl-accepting chemotaxis protein  48.08 
 
 
540 aa  110  4.0000000000000004e-23  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.141989  normal 
 
 
-
 
NC_013521  Sked_06110  methyl-accepting chemotaxis protein  48.46 
 
 
533 aa  110  4.0000000000000004e-23  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.232988  normal 
 
 
-
 
NC_007643  Rru_A1802  chemotaxis sensory transducer  46.62 
 
 
438 aa  109  5e-23  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_0581  methyl-accepting chemotaxis sensory transducer  40.28 
 
 
562 aa  109  5e-23  Methylobacterium populi BJ001  Bacteria  normal  0.0281709  decreased coverage  0.00474558 
 
 
-
 
NC_008578  Acel_1751  methyl-accepting chemotaxis sensory transducer  48.94 
 
 
547 aa  109  6e-23  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0644  putative methyl-accepting chemotaxis receptor/sensory transducer  37.95 
 
 
565 aa  109  6e-23  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2907  putative methyl-accepting chemotaxis protein  46.58 
 
 
556 aa  109  7.000000000000001e-23  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.835875  normal  0.0729634 
 
 
-
 
NC_007778  RPB_4280  methyl-accepting chemotaxis sensory transducer  36.52 
 
 
563 aa  109  7.000000000000001e-23  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_5119  methyl-accepting chemotaxis sensory transducer  41.21 
 
 
563 aa  109  7.000000000000001e-23  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1293  methyl-accepting chemotaxis sensory transducer  45.03 
 
 
562 aa  109  8.000000000000001e-23  Rhodospirillum rubrum ATCC 11170  Bacteria  decreased coverage  0.00511002  n/a   
 
 
-
 
NC_011004  Rpal_4788  methyl-accepting chemotaxis sensory transducer  45.07 
 
 
561 aa  109  8.000000000000001e-23  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_1857  chemotaxis sensory transducer  47.18 
 
 
563 aa  108  8.000000000000001e-23  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_4549  methyl-accepting chemotaxis sensory transducer  49.3 
 
 
561 aa  109  8.000000000000001e-23  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_0679  methyl-accepting chemotaxis sensory transducer  49.3 
 
 
565 aa  108  9.000000000000001e-23  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.0248904 
 
 
-
 
NC_007958  RPD_1025  methyl-accepting chemotaxis sensory transducer  46.26 
 
 
681 aa  108  9.000000000000001e-23  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_4435  methyl-accepting chemotaxis sensory transducer  47.89 
 
 
561 aa  108  1e-22  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0198477  normal 
 
 
-
 
NC_007643  Rru_A0568  chemotaxis sensory transducer  36.32 
 
 
662 aa  108  1e-22  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_2983  methyl-accepting chemotaxis sensory transducer  40.89 
 
 
561 aa  108  1e-22  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0323515 
 
 
-
 
NC_007925  RPC_3377  methyl-accepting chemotaxis sensory transducer  45.07 
 
 
563 aa  108  1e-22  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.528008  normal 
 
 
-
 
NC_007925  RPC_3380  methyl-accepting chemotaxis sensory transducer  40.39 
 
 
567 aa  108  1e-22  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.689596 
 
 
-
 
NC_013093  Amir_2323  methyl-accepting chemotaxis sensory transducer  47.18 
 
 
545 aa  108  1e-22  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1293  chemotaxis sensory transducer  50.75 
 
 
542 aa  108  1e-22  Nocardioides sp. JS614  Bacteria  normal  0.320257  n/a   
 
 
-
 
NC_010172  Mext_0667  chemotaxis sensory transducer  49.3 
 
 
565 aa  108  1e-22  Methylobacterium extorquens PA1  Bacteria  normal  0.510632  normal  0.195802 
 
 
-
 
NC_010172  Mext_4068  chemotaxis sensory transducer  47.89 
 
 
591 aa  108  1e-22  Methylobacterium extorquens PA1  Bacteria  normal  0.269414  normal 
 
 
-
 
NC_010505  Mrad2831_3082  methyl-accepting chemotaxis sensory transducer  52.42 
 
 
556 aa  108  1e-22  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.27714  normal 
 
 
-
 
NC_007964  Nham_1080  methyl-accepting chemotaxis sensory transducer  44.97 
 
 
698 aa  108  1e-22  Nitrobacter hamburgensis X14  Bacteria  normal  0.0139762  n/a   
 
 
-
 
NC_011004  Rpal_5120  methyl-accepting chemotaxis sensory transducer  46.58 
 
 
563 aa  108  1e-22  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_003912  CJE1324  methyl-accepting chemotaxis protein  30.47 
 
 
459 aa  107  2e-22  Campylobacter jejuni RM1221  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_3427  methyl-accepting chemotaxis sensory transducer  45.39 
 
 
568 aa  107  2e-22  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0133436 
 
 
-
 
NC_008787  CJJ81176_1205  methyl-accepting chemotaxis protein  30.47 
 
 
459 aa  107  2e-22  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_0811  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  48.95 
 
 
495 aa  108  2e-22  Maricaulis maris MCS10  Bacteria  normal  0.371066  hitchhiker  0.000363939 
 
 
-
 
NC_009485  BBta_5110  hypothetical protein  45.21 
 
 
688 aa  108  2e-22  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.791751 
 
 
-
 
NC_007778  RPB_2250  methyl-accepting chemotaxis sensory transducer  39.41 
 
 
670 aa  107  2e-22  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2900  putative methyl-accepting chemotaxis receptor/sensory transducer (chemoreceptor)  46.58 
 
 
675 aa  108  2e-22  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.142675  normal  0.173139 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>