More than 300 homologs were found in PanDaTox collection
for query gene Haur_1345 on replicon NC_009972
Organism: Herpetosiphon aurantiacus ATCC 23779



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009972  Haur_1345  response regulator receiver protein  100 
 
 
126 aa  251  4.0000000000000004e-66  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_3508  response regulator receiver  34.75 
 
 
119 aa  74.3  0.0000000000006  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_0174  response regulator receiver  36.21 
 
 
130 aa  73.2  0.000000000001  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_1077  two component transcriptional regulator, winged helix family  32.52 
 
 
235 aa  71.6  0.000000000003  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_4410  response regulator receiver protein  35.2 
 
 
131 aa  71.2  0.000000000004  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.686937 
 
 
-
 
NC_013517  Sterm_1086  two component transcriptional regulator, winged helix family  32.56 
 
 
221 aa  70.5  0.000000000008  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_0870  response regulator receiver protein  37.61 
 
 
117 aa  69.7  0.00000000001  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.226165  normal  0.635424 
 
 
-
 
NC_013061  Phep_0793  response regulator receiver  30.51 
 
 
120 aa  69.3  0.00000000002  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_3340  response regulator receiver  33.62 
 
 
131 aa  68.6  0.00000000003  Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.269643 
 
 
-
 
NC_006348  BMA1740  nitrogen regulation protein NR(I)  34.15 
 
 
511 aa  68.2  0.00000000004  Burkholderia mallei ATCC 23344  Bacteria  normal  0.58726  n/a   
 
 
-
 
NC_009076  BURPS1106A_2688  nitrogen regulation protein NR(I)  34.15 
 
 
511 aa  68.2  0.00000000004  Burkholderia pseudomallei 1106a  Bacteria  normal  0.231553  n/a   
 
 
-
 
NC_007434  BURPS1710b_2766  nitrogen regulation protein NR(I)  34.15 
 
 
511 aa  68.2  0.00000000004  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1846  nitrogen regulation protein NR(I)  34.15 
 
 
513 aa  68.2  0.00000000004  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2250  nitrogen regulation protein NR(I)  34.15 
 
 
511 aa  68.2  0.00000000004  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_1522  nitrogen regulation protein NR(I)  34.15 
 
 
511 aa  68.2  0.00000000004  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A3069  nitrogen regulation protein NR(I)  34.15 
 
 
511 aa  68.2  0.00000000004  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_2632  nitrogen regulation protein NR(I)  34.15 
 
 
511 aa  68.2  0.00000000004  Burkholderia pseudomallei 668  Bacteria  normal  0.472177  n/a   
 
 
-
 
NC_007005  Psyr_1098  PAS:GGDEF  33.33 
 
 
705 aa  67.8  0.00000000005  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008043  TM1040_3373  two component transcriptional regulator  32.48 
 
 
238 aa  67  0.00000000008  Ruegeria sp. TM1040  Bacteria  normal  0.584151  normal  0.399207 
 
 
-
 
NC_012034  Athe_1751  two component transcriptional regulator, winged helix family  29.75 
 
 
234 aa  67  0.00000000008  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_1278  sensory box protein/response regulator  33.87 
 
 
705 aa  67  0.00000000009  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.517683  n/a   
 
 
-
 
NC_008820  P9303_26471  two-component response regulator  33.33 
 
 
268 aa  66.6  0.0000000001  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  0.889517 
 
 
-
 
NC_011662  Tmz1t_1352  response regulator receiver protein  36.13 
 
 
410 aa  66.6  0.0000000001  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_0707  two component transcriptional regulator  32.77 
 
 
232 aa  66.6  0.0000000001  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_1559  two component transcriptional regulator  33.33 
 
 
224 aa  66.2  0.0000000001  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.204072  n/a   
 
 
-
 
NC_009511  Swit_0247  nitrogen metabolism transcriptional regulator, NtrC, Fis family  38.53 
 
 
485 aa  66.6  0.0000000001  Sphingomonas wittichii RW1  Bacteria  normal  0.898521  normal  0.0558214 
 
 
-
 
NC_002947  PP_5048  nitrogen metabolism transcriptional regulator NtrC  34.19 
 
 
478 aa  65.5  0.0000000002  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_1777  metal dependent phosphohydrolase, HD region with response regulator receiver modulation  34.45 
 
 
414 aa  65.9  0.0000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_0373  two component transcriptional regulator  32.52 
 
 
238 aa  65.9  0.0000000002  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.873901 
 
 
-
 
NC_010508  Bcenmc03_2165  nitrogen metabolism transcriptional regulator, NtrC, Fis family  33.33 
 
 
504 aa  65.9  0.0000000002  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.175856  normal  0.928709 
 
 
-
 
NC_007510  Bcep18194_A5456  nitrogen metabolism transcriptional regulator, NtrC, Fis family  33.33 
 
 
506 aa  65.9  0.0000000002  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007513  Syncc9902_0314  two component transcriptional regulator  33.87 
 
 
259 aa  65.9  0.0000000002  Synechococcus sp. CC9902  Bacteria  normal  0.645458  n/a   
 
 
-
 
NC_010084  Bmul_1124  nitrogen metabolism transcriptional regulator, NtrC, Fis family  33.33 
 
 
504 aa  65.9  0.0000000002  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.359877  normal  0.272009 
 
 
-
 
NC_007948  Bpro_4253  two component transcriptional regulator  35.54 
 
 
228 aa  65.9  0.0000000002  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_4923  nitrogen metabolism transcriptional regulator NtrC  34.19 
 
 
478 aa  65.5  0.0000000002  Pseudomonas putida F1  Bacteria  normal  0.924842  normal 
 
 
-
 
NC_008062  Bcen_5930  nitrogen metabolism transcriptional regulator, NtrC, Fis family  33.33 
 
 
504 aa  65.9  0.0000000002  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.343161  n/a   
 
 
-
 
NC_008542  Bcen2424_2147  nitrogen metabolism transcriptional regulator, NtrC, Fis family  33.33 
 
 
504 aa  65.9  0.0000000002  Burkholderia cenocepacia HI2424  Bacteria  normal  0.447968  n/a   
 
 
-
 
NC_009441  Fjoh_2076  histidine kinase  30 
 
 
1373 aa  65.5  0.0000000002  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2219  response regulator  29.41 
 
 
123 aa  65.1  0.0000000003  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_2657  response regulator receiver  36.89 
 
 
121 aa  65.1  0.0000000003  Pedobacter heparinus DSM 2366  Bacteria  normal  0.970877  normal  0.494085 
 
 
-
 
NC_004578  PSPTO_0352  nitrogen regulation protein NR(I)  31.3 
 
 
478 aa  65.5  0.0000000003  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_4822  helix-turn-helix, Fis-type:nitrogen regulation protein NR(I)  31.3 
 
 
478 aa  65.5  0.0000000003  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A2054  helix-turn-helix, Fis-type:nitrogen regulation protein NR(I)  34.15 
 
 
524 aa  65.1  0.0000000003  Ralstonia eutropha JMP134  Bacteria  normal  0.652577  n/a   
 
 
-
 
NC_007492  Pfl01_0339  nitrogen metabolism transcriptional regulator, NtrC, Fis family  31.3 
 
 
478 aa  65.5  0.0000000003  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_2059  nitrogen metabolism transcriptional regulator, NtrC, Fis family  34.96 
 
 
528 aa  65.1  0.0000000003  Cupriavidus metallidurans CH34  Bacteria  normal  0.0914415  normal 
 
 
-
 
NC_009523  RoseRS_2694  putative PAS/PAC sensor protein  32 
 
 
969 aa  65.5  0.0000000003  Roseiflexus sp. RS-1  Bacteria  normal  0.0176534  normal 
 
 
-
 
NC_009972  Haur_1343  response regulator receiver protein  35.4 
 
 
121 aa  64.7  0.0000000004  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_5101  nitrogen metabolism transcriptional regulator NtrC  31.3 
 
 
478 aa  64.7  0.0000000004  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_3714  response regulator receiver domain-containing protein  34.19 
 
 
131 aa  65.1  0.0000000004  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1641  response regulator receiver protein  36.59 
 
 
128 aa  64.7  0.0000000004  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000000126042  n/a   
 
 
-
 
NC_009441  Fjoh_0638  two component, sigma54 specific, Fis family transcriptional regulator  32.52 
 
 
453 aa  65.1  0.0000000004  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2803  DNA-binding transcriptional regulator TorR  31.45 
 
 
241 aa  64.7  0.0000000004  Shewanella loihica PV-4  Bacteria  normal  hitchhiker  0.00131566 
 
 
-
 
NC_007908  Rfer_2540  two component transcriptional regulator  33.88 
 
 
228 aa  64.3  0.0000000005  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2826  two component, sigma54 specific, Fis family transcriptional regulator  38.46 
 
 
461 aa  64.3  0.0000000006  Marinobacter aquaeolei VT8  Bacteria  normal  0.244879  n/a   
 
 
-
 
NC_010682  Rpic_1089  nitrogen metabolism transcriptional regulator, NtrC, Fis Family  34.15 
 
 
502 aa  63.9  0.0000000007  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0479  two component transcriptional regulator  35.58 
 
 
228 aa  63.9  0.0000000007  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_1997  two component transcriptional regulator  31.45 
 
 
234 aa  63.9  0.0000000007  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.000000742772  n/a   
 
 
-
 
NC_012856  Rpic12D_1182  nitrogen metabolism transcriptional regulator, NtrC, Fis Family  34.15 
 
 
502 aa  63.9  0.0000000007  Ralstonia pickettii 12D  Bacteria  normal  0.135546  normal 
 
 
-
 
NC_011830  Dhaf_1237  two component transcriptional regulator, winged helix family  31.2 
 
 
234 aa  63.5  0.0000000008  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.178035  n/a   
 
 
-
 
NC_007778  RPB_3966  response regulator receiver domain-containing protein  33.33 
 
 
278 aa  63.9  0.0000000008  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.537715 
 
 
-
 
NC_008578  Acel_1606  two component transcriptional regulator  31.5 
 
 
230 aa  63.9  0.0000000008  Acidothermus cellulolyticus 11B  Bacteria  normal  0.307098  normal  0.688459 
 
 
-
 
NC_009952  Dshi_1574  nitrogen assimilation regulator receiver protein  31.45 
 
 
454 aa  63.5  0.0000000009  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.281869  normal  0.0357096 
 
 
-
 
NC_010577  XfasM23_1085  nitrogen metabolism transcriptional regulator, NtrC, Fis family  38.89 
 
 
475 aa  62.8  0.000000001  Xylella fastidiosa M23  Bacteria  normal  0.0382601  n/a   
 
 
-
 
NC_006349  BMAA0746  DNA-binding response regulator  31.93 
 
 
245 aa  63.2  0.000000001  Burkholderia mallei ATCC 23344  Bacteria  normal  0.413916  n/a   
 
 
-
 
NC_008835  BMA10229_0713  DNA-binding response regulator  31.93 
 
 
245 aa  63.2  0.000000001  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_4313  multi-sensor hybrid histidine kinase  35.83 
 
 
965 aa  63.2  0.000000001  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.975749 
 
 
-
 
NC_010551  BamMC406_2057  nitrogen metabolism transcriptional regulator, NtrC, Fis family  32.52 
 
 
508 aa  63.2  0.000000001  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007435  BURPS1710b_A0531  DNA-binding response regulator  31.93 
 
 
245 aa  63.2  0.000000001  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2023  DNA-binding response regulator  31.93 
 
 
245 aa  63.2  0.000000001  Burkholderia pseudomallei 1106a  Bacteria  normal  0.485022  n/a   
 
 
-
 
NC_007516  Syncc9605_2378  two component transcriptional regulator  33.33 
 
 
262 aa  63.2  0.000000001  Synechococcus sp. CC9605  Bacteria  normal  normal  0.936352 
 
 
-
 
NC_013889  TK90_2268  two component, sigma54 specific, transcriptional regulator, Fis family  30.53 
 
 
459 aa  62.8  0.000000001  Thioalkalivibrio sp. K90mix  Bacteria  normal  hitchhiker  0.00701331 
 
 
-
 
NC_009075  BURPS668_A2121  DNA-binding response regulator  31.93 
 
 
245 aa  63.2  0.000000001  Burkholderia pseudomallei 668  Bacteria  normal  0.0885999  n/a   
 
 
-
 
NC_010501  PputW619_0415  nitrogen metabolism transcriptional regulator, NtrC, Fis family  30.43 
 
 
478 aa  62.8  0.000000001  Pseudomonas putida W619  Bacteria  normal  normal  0.855382 
 
 
-
 
NC_009079  BMA10247_A1669  DNA-binding response regulator  31.93 
 
 
245 aa  63.2  0.000000001  Burkholderia mallei NCTC 10247  Bacteria  normal  0.501573  n/a   
 
 
-
 
NC_010513  Xfasm12_1119  response regulator receiver protein  36.13 
 
 
475 aa  63.2  0.000000001  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_0602  DNA-binding response regulator  31.93 
 
 
245 aa  63.2  0.000000001  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_2184  nitrogen metabolism transcriptional regulator, NtrC, Fis family  32.52 
 
 
508 aa  62.8  0.000000001  Burkholderia ambifaria AMMD  Bacteria  normal  0.654908  n/a   
 
 
-
 
NC_008463  PA14_67680  two-component response regulator NtrC  29.57 
 
 
476 aa  62.8  0.000000001  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.000437551  normal 
 
 
-
 
NC_009943  Dole_2257  response regulator receiver protein  30.17 
 
 
120 aa  63.2  0.000000001  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_4144  nitrogen metabolism transcriptional regulator, NtrC, Fis family  30.43 
 
 
477 aa  62.8  0.000000001  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc1261  nitrogen assimilation regulatory response regulator transcription regulator protein  33.33 
 
 
502 aa  62  0.000000002  Ralstonia solanacearum GMI1000  Bacteria  normal  0.634694  normal  0.380909 
 
 
-
 
NC_009976  P9211_01421  two-component response regulator  32.26 
 
 
258 aa  62  0.000000002  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  normal  0.341989 
 
 
-
 
NC_010682  Rpic_3671  two component transcriptional regulator, Fis family  34.15 
 
 
236 aa  62.4  0.000000002  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_2034  nitrogen metabolism transcriptional regulator, NtrC, Fis family  31.93 
 
 
487 aa  62.4  0.000000002  Acidiphilium cryptum JF-5  Bacteria  normal  0.669583  n/a   
 
 
-
 
NC_011831  Cagg_1858  two component transcriptional regulator, winged helix family  32.5 
 
 
227 aa  62.8  0.000000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_2703  two component transcriptional regulator  35.48 
 
 
241 aa  62.4  0.000000002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.790666  normal  0.110517 
 
 
-
 
NC_009632  SaurJH1_2154  response regulator receiver  35.71 
 
 
231 aa  62.8  0.000000002  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.0828561  n/a   
 
 
-
 
NC_007614  Nmul_A0389  two component, sigma54 specific, Fis family transcriptional regulator  33.9 
 
 
432 aa  62.8  0.000000002  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_2613  nitrogen metabolism transcriptional regulator, NtrC, Fis Family  33.05 
 
 
505 aa  62.8  0.000000002  Burkholderia phytofirmans PsJN  Bacteria  normal  0.262075  normal  0.337691 
 
 
-
 
NC_007794  Saro_1928  two component, sigma54 specific, Fis family transcriptional regulator  36.44 
 
 
477 aa  62.8  0.000000002  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_008819  NATL1_02001  two-component response regulator  32.26 
 
 
265 aa  62  0.000000002  Prochlorococcus marinus str. NATL1A  Bacteria  normal  normal  0.824437 
 
 
-
 
NC_007951  Bxe_A1524  nitrogen metabolism transcriptional regulator, NtrC, Fis family  33.05 
 
 
505 aa  62.8  0.000000002  Burkholderia xenovorans LB400  Bacteria  normal  0.437869  normal  0.0359262 
 
 
-
 
NC_009656  PSPA7_5859  two-component response regulator NtrC  29.57 
 
 
476 aa  62.4  0.000000002  Pseudomonas aeruginosa PA7  Bacteria  normal  0.421071  n/a   
 
 
-
 
NC_011884  Cyan7425_4868  response regulator receiver protein  30.51 
 
 
143 aa  62.8  0.000000002  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_009379  Pnuc_1597  two component transcriptional regulator  31.62 
 
 
237 aa  62.4  0.000000002  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_0399  two component transcriptional regulator  31.4 
 
 
272 aa  62.4  0.000000002  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.802217  normal 
 
 
-
 
NC_012560  Avin_45900  nitrogen regulation protein, sigma 54-dependent response regulator NtrC (NR(I))  30.43 
 
 
478 aa  62.8  0.000000002  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1148  two component transcriptional regulator  28.93 
 
 
243 aa  62.4  0.000000002  Pseudomonas mendocina ymp  Bacteria  hitchhiker  0.000285872  normal  0.61114 
 
 
-
 
NC_009012  Cthe_0537  two component transcriptional regulator  33.07 
 
 
223 aa  62.4  0.000000002  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.340982  n/a   
 
 
-
 
NC_008751  Dvul_2719  response regulator receiver protein  30.77 
 
 
142 aa  62.4  0.000000002  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.617775 
 
 
-
 
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