Gene Acel_1606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1606 
Symbol 
ID4486510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1808191 
End bp1808883 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content66% 
IMG OID639730392 
Producttwo component transcriptional regulator 
Protein accessionYP_873364 
Protein GI117928813 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.307098 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.688459 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTGC CGCGGTTGTT GCTCATCGAA GATGATCCGG CGATCCGGAC GACGCTTACC 
CGCTCGCTCA CCGAGAAAGG GCATGCCGTG GCGTCCGCGC CGTCGGCAAT GACGGGGTTG
CAGGCCGTGG TGGCGGAGGC GCCTGACCTC GTCGTCCTCG ACCTCGGCTT GCCGGACCTC
GACGGGGGGA CGCTGATTCA AATGGTCCGT GCGGTCAGCA AAGTCCCGAT CATCGTTGCC
ACCGCGCGGG ACGACGAACG GGAAATGGTC CGCATTCTCG ACGCCGGAGC CGACGACTAC
GTCGTCAAAC CCTTCGCCTC CGACCATCTC GAGGCTCGAA TCCGGGCAGT GCTTCGGCGT
ACCGCGGCGG ACGGCGCCAT GCCACCGCTT GTCGTCGGCG GATTGCGGAT CGACCGGCGG
TCCAGGGAAG CGACGTTGGA CGGGCGTCCG CTTGACCTTA CCCGCAAGGA ATTCGACCTG
CTGGCATATC TCGCCGAACA TGCCGGTGAA GTGGTCACGA AACGAGCGAT TCTCGCCGAG
GTCTGGCAGC AGGCATATGG CGGCGCGGAC AAGACCGTCG ACGTCCACCT GTCGTGGTTG
CGGCGCAAAC TCGGCGAAAC CGCTCTTGAG CCGCGGTATC TCGTGAGCAT CCGGGGAGTG
GGAGTCAAGC TCGTGGACCC CACGGCCGGC TAG
 
Protein sequence
MSVPRLLLIE DDPAIRTTLT RSLTEKGHAV ASAPSAMTGL QAVVAEAPDL VVLDLGLPDL 
DGGTLIQMVR AVSKVPIIVA TARDDEREMV RILDAGADDY VVKPFASDHL EARIRAVLRR
TAADGAMPPL VVGGLRIDRR SREATLDGRP LDLTRKEFDL LAYLAEHAGE VVTKRAILAE
VWQQAYGGAD KTVDVHLSWL RRKLGETALE PRYLVSIRGV GVKLVDPTAG