| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2803 |
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| Symbol | |
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| ID | 4922537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3321446 |
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| End bp | 3322171 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640164398 |
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| Product | DNA-binding transcriptional regulator TorR |
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| Protein accession | YP_001094928 |
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| Protein GI | 127513731 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00131566 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCCCTAA CTTCATTACA ACCTTGTGTG CTTGTGGTCG ATGATGAGGC GGTGATCCGT
GCTCGCCTGA AGGGCTATTT CGAGAAAGAG GGTTATCGGG TGCTCGAAGC CGCCGACGGT
GAAGAGATGT GGCAGCAGTT CAGTCAGCAG CATATCGATC TGGTGATGTT GGACATCAAC
CTGCCCGGCG TCGATGGCCT CAGCCTGACC CGCGAACTGC GCAGCCGATC CGAGGTAGGC
ATCATACTCG TGACCGGGCG CGACGAGGCG ATCGATAAGA TCATCGGCCT GGAGATGGGC
GCCGACGACT ATGTGACTAA GCCCTTCGAG CTGCGTGAAC TCTTGGTGCG GGTGAAGAAT
TTGCTCTGGC GCATCTCACT GGTGAAGAAG GCGCAGCAGC AGGCGATTGC CGAGCTGGAG
CGGTGTGACG ATCTTATCGA GTTTGAAGAT TACAGCCTGG CCCTCAACAG CCGCAGGCTC
TCCCAAGGCG AGGCGGTGAT TAAGCTGACT AAGGCGGAGT TTGAGCTGCT TAGCGCCTTC
GTGCTGCACC CACAGCAGGT GCTGAGCCGT GAACGCCTGA TGCAGCTGAC CAGCCATCGC
AATCAAGATG TCAACGACAG AACCATAGAT GTGATCATCC GCCGCCTGCG TAACAAGCTA
CATGCGGAGC TCTTCGTTAC CGTCCACGGC GAGGGCTATC TGTTCTCGGC AAAAGTAGAA
GATTAG
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| Protein sequence | MALTSLQPCV LVVDDEAVIR ARLKGYFEKE GYRVLEAADG EEMWQQFSQQ HIDLVMLDIN
LPGVDGLSLT RELRSRSEVG IILVTGRDEA IDKIIGLEMG ADDYVTKPFE LRELLVRVKN
LLWRISLVKK AQQQAIAELE RCDDLIEFED YSLALNSRRL SQGEAVIKLT KAEFELLSAF
VLHPQQVLSR ERLMQLTSHR NQDVNDRTID VIIRRLRNKL HAELFVTVHG EGYLFSAKVE
D
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