Gene Phep_3340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3340 
Symbol 
ID8254459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3961422 
End bp3961817 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content40% 
IMG OID644936992 
Productresponse regulator receiver 
Protein accessionYP_003093596 
Protein GI255533224 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.269643 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAATA TATTGATTGT TGAAAATGAC AGTGGTTTAG TAGAGATGCT CGAAGAATTG 
TTTGGTTATG AAGGTTATCA GGTAAGTTGT CATCAGCAGG TTGAAGATAT ATTTCCACTG
ATTGAAAGCT TTAAGCCTGA TGTGGTTTTG CTGGATTATT TGTTGCCAGG GATAAACGGC
GGAGAGGTTT GTGCACAAAT GAAAAGGAAC CCTGAAACGC GTAAAATTCC GGTAATTATT
TTTTCTGCCT ATCCGCAGGT TATGCTGTCA CTTGGCAGCT ATGGATGTAA CGCTTTTATC
TCAAAGCCCT TTGAACTTGA TGCCTTACTG GATCAGATTA ACGATTGTCT GGAAAACCCC
GATAGGGTTT TTGAATTGAG CTCGCCCCTG GCTTAA
 
Protein sequence
MKNILIVEND SGLVEMLEEL FGYEGYQVSC HQQVEDIFPL IESFKPDVVL LDYLLPGING 
GEVCAQMKRN PETRKIPVII FSAYPQVMLS LGSYGCNAFI SKPFELDALL DQINDCLENP
DRVFELSSPL A