Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2057 |
Symbol | |
ID | 6175968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 2296143 |
End bp | 2297669 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641681824 |
Product | nitrogen metabolism transcriptional regulator, NtrC, Fis family |
Protein accession | YP_001808754 |
Protein GI | 172061102 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR01818] nitrogen regulation protein NR(I) |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCCGA TCTGGATAGT AGACGACGAC CAATCGATCC GCTGGGTGCT CGAAAAGGCA CTCGCCCGGG ACAGCTTCGC GACGAAGAGT TTCGCGAACG TGCGCGACGC GCTGGCCGCG CTCGACCACG AGACGCCGCA GGTGCTCGTA TCCGACATCC GGATGCCGGG CGGCTCCGGC CTCGAATTGC TGCAGGCGGT GCACGAGCGT CTGCCGGACC TGCCCGTCAT CATCATGACG GCGTTCTCCG ATCTCGACAG CGCCGTCGCG GCGTTCCAGG GCGGCGCGTT CGAATATCTC GCGAAGCCGT TCGACGTCGA CAAGGCGGTG GAGCTGATCC GCCGCGCGGT CGAGGAAAGC CTGCGCGGCG GCGCGCCGCA GGACGAGCGC GTGGCCGAAG CGCCCGAGAT GCTCGGCCAG GCGCCCGCGA TGCAGGACAT GTTCCGCGCG ATCGGCCGCC TGTCGCATTC GGCCGCGACC GTGCTGATCA CCGGCGAATC GGGCACCGGC AAGGAGCTCG TCGCGCGGGC GCTGCACCGG CACAGCCCGC GCGCGAACGG ACCGTTCATC GCGCTGAACA CCGCGGCGAT TCCGAAGGAC CTGCTCGAAT CCGAACTGTT CGGTCATGAA CGCGGCGCGT TCACCGGCGC GCAGACGACC CGCCAGGGCC GCTTCGAACA GGCCGAGAAC GGCACGCTGT TCCTCGACGA AATCGGCGAC ATGCCGTTCG ACCTGCAGAC ACGCCTGTTG CGCGTGCTGT CGGACGGGCA GTTCTATCGC GTGGGCGGCC ACAACCCGCT GCGCGCGAAC GTGCGCGTGA TCGCCGCGAC GCACCAGAAT CTCGAGGCGC GCGTGCGGCA GGGGCTGTTC CGCGAGGATC TTTATCACCG GCTCAACGTG ATCCGGCTGC GGCTGCCGCC GCTGCGCGAA CGCAGCGAGG ACATCGCGCT GCTCACGCGC CACTTTCTGC AGAAGAGTGC GCGCGATCTC GGCGTCGAGC CCAAGCGCGT GTCCGACGAC GCGCTGGCGT ACCTGACGTC GTTGTCGTTC CCCGGCAACG TGCGGCAGCT CGAGAATCTC GCGAACTGGC TGACCGTGAT GGCGCCCGCG CAGACGGTCG AGATCAAGGA CCTGCCGCCC GACCTCGTGC CGGCAGGCGC GCCGGTGACT GCAACGGCCG ATGGCATCGA TGCGCACGGC GGCGCGGGCA TCGGCGGTGG CGACGCGCTG CGCGTGCCGC CGGCGGCCGG TACGGCGCCG TTGACGGCGG CGCCCGTCGC GGCCGCGCCG AACGGCGCGC CGGCCGGCTA TCCGATGTGG GAAAACGGGC TGCGCACCGA AGTCGCGCGG CTGTTGCGCG AGAACTCGGC CGACGTGATG GACGAGCTCG CGCGCCGCTT CGAGGCGGCC GTGATCCGCG AGGCCCTCGA CTTCACGCGC GGCCGCAAGG TCGAGGCGGC GGAGCGGCTC GGCATCGGCC GCAACACGAT CACGCGCAAG ATCCAGGAAC TGCACCTGGA GCCTTGA
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Protein sequence | MKPIWIVDDD QSIRWVLEKA LARDSFATKS FANVRDALAA LDHETPQVLV SDIRMPGGSG LELLQAVHER LPDLPVIIMT AFSDLDSAVA AFQGGAFEYL AKPFDVDKAV ELIRRAVEES LRGGAPQDER VAEAPEMLGQ APAMQDMFRA IGRLSHSAAT VLITGESGTG KELVARALHR HSPRANGPFI ALNTAAIPKD LLESELFGHE RGAFTGAQTT RQGRFEQAEN GTLFLDEIGD MPFDLQTRLL RVLSDGQFYR VGGHNPLRAN VRVIAATHQN LEARVRQGLF REDLYHRLNV IRLRLPPLRE RSEDIALLTR HFLQKSARDL GVEPKRVSDD ALAYLTSLSF PGNVRQLENL ANWLTVMAPA QTVEIKDLPP DLVPAGAPVT ATADGIDAHG GAGIGGGDAL RVPPAAGTAP LTAAPVAAAP NGAPAGYPMW ENGLRTEVAR LLRENSADVM DELARRFEAA VIREALDFTR GRKVEAAERL GIGRNTITRK IQELHLEP
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