| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3373 |
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| Symbol | |
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| ID | 4075272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 386263 |
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| End bp | 386979 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638004881 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_611607 |
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| Protein GI | 99078349 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.584151 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.399207 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCACG CAGCCGAAGC AAAGAGAATT CTGGTCTGTG ACGATGAACA TCACCTGCGA
GAGATGTTGT CGGAGTACCT CTGCGAAAGA GGTTACGAGG TGATGGAAGC GGAAAACGCC
GATGCCATGC TTGCTGTCTT CAACGACGAC ACCCCCGATG TGGTGGTTCT GGACATCAAT
ATGCCCGGAA CGGATGGGCT GACGGCGCTG CGTACGTTGA GGGTCAACTC GACGATCCCG
GTGATCATGC TCTCCGCCGC AGGAGAGGTG GTTGATCGGA TCGTCGGGTT GGAAATGGGC
GCGGATGATT ATCTGGCAAA GCCGGTTGAC CTGCGCGAGC TTGAGGCGCG CATCAAGGCG
GCGTTGCGGC GCCAGGGTTT TGCCGGGGAG GAAAGCGCGC AAAGGGATCG AATGACGGGC
ACCGTTCCCT TTGGCATGTG TCGTCTAGAC CTCGACGGCG CCAAGCTTTT TGGAGAGAGC
GGCGAAGAGA TCGCTATAAC ATCCATGGAG TTCAGCCTAC TTCGCGTTTT TGCTCAGAAC
CGGGGACGTG TGCTGAATAG GGATCAATTG CTTGAACAGG CGCATGACCG CGGGTGGGAA
CATTTTGACC GCTCGATCGA TCTGCGGATC TCACGCCTGA GGCGCAAGAT CGAGCAAAAC
CCCACGAAGC CCGAAACCAT CCGAACCGTC CGCGGGATCG GCTATATCTT TGACTGA
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| Protein sequence | MTHAAEAKRI LVCDDEHHLR EMLSEYLCER GYEVMEAENA DAMLAVFNDD TPDVVVLDIN
MPGTDGLTAL RTLRVNSTIP VIMLSAAGEV VDRIVGLEMG ADDYLAKPVD LRELEARIKA
ALRRQGFAGE ESAQRDRMTG TVPFGMCRLD LDGAKLFGES GEEIAITSME FSLLRVFAQN
RGRVLNRDQL LEQAHDRGWE HFDRSIDLRI SRLRRKIEQN PTKPETIRTV RGIGYIFD
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