| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2184 |
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| Symbol | |
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| ID | 4310090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 2403532 |
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| End bp | 2405058 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638150010 |
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| Product | nitrogen metabolism transcriptional regulator, NtrC, Fis family |
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| Protein accession | YP_774074 |
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| Protein GI | 115352235 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR01818] nitrogen regulation protein NR(I) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.654908 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCCGA TCTGGATAGT AGACGACGAC CAATCGATCC GCTGGGTGCT CGAAAAGGCA
CTCGCCCGGG ACAGCTTCGC GACGAAGAGT TTCGCGAACG TGCGCGACGC GCTGGCCGCG
CTCGACCACG AGACGCCGCA GGTGCTCGTA TCCGACATCC GGATGCCGGG CGGCTCCGGC
CTCGAGTTGT TGCAGGCGGT GCACGAGCGT CTGCCGGACC TGCCCGTCAT CATCATGACG
GCGTTCTCCG ATCTCGACAG CGCCGTCGCG GCGTTCCAGG GCGGCGCGTT CGAATATCTC
GCGAAGCCGT TCGACGTCGA CAAGGCGGTG GAGCTGATCC GCCGCGCGGT CGAGGAAAGC
CTGCGCGGCG GCGCGCCGCA GGACGAGCGC GTGGCCGAGG CGCCCGAGAT GCTCGGCCAG
GCGCCCGCGA TGCAGGACAT GTTCCGCGCG ATCGGCCGCC TGTCGCATTC GGCCGCGACC
GTGCTGATCA CCGGCGAATC GGGCACCGGC AAGGAGCTCG TCGCACGGGC GCTCCACCGG
CACAGCCCGC GCGCGAACGG ACCGTTCATC GCGCTGAACA CCGCGGCGAT CCCGAAGGAC
CTGCTCGAAT CCGAACTGTT CGGCCATGAG CGCGGCGCGT TCACCGGCGC GCAGACGACG
CGCCAGGGCC GCTTCGAACA GGCCGAGAAC GGCACGCTGT TCCTCGACGA AATCGGCGAC
ATGCCGTTCG ACCTGCAGAC GCGCTTGTTG CGCGTGCTGT CGGACGGGCA GTTCTACCGC
GTCGGCGGCC ACAACCCGCT GCGCGCGAAC GTGCGCGTGA TCGCCGCGAC GCATCAGAAT
CTCGAGGCGC GCGTGCGGCA GGGGCTGTTC CGCGAGGACC TTTACCACCG GCTCAACGTG
ATCCGGCTGC GGCTGCCGCC GCTGCGCGAA CGCAGCGAGG ATATCGCGCT GCTCACGCGC
CACTTCCTGC AGAAGAGCGC GCGCGATCTC GGCGTCGAGC CCAAGCGCGT GTCCGACGAC
GCGCTGGCGT ACCTGACGTC GTTGTCGTTC CCCGGCAACG TGCGGCAGCT CGAGAATCTC
GCGAACTGGC TGACCGTGAT GGCGCCAGCG CAGACGGTCG AGATCAAGGA TCTGCCGCCC
GACCTCGTGC CGGCAGGCGC GCCGGTGACT GCGACGGCCG ATGGCATCGA TGCGCACGGC
GGCGCGAGCA TCGGCGGTGG CGACGCGCTG CGCGTACAGC CGGCGGCCGG TGCGGCGCCG
TTGACGGCGG CGCCCGTCGC GGCCGCGCCG AACGGTGCGC CGGCCGGCTA TCCGATGTGG
GAAAACGGGC TGCGCACCGA AGTCGCACGG CTGTTGCGCG AGAACTCGGC CGACGTGATG
GACGAGCTCG CGCGCCGCTT CGAGGCGGCC GTGATCCGCG AGGCGCTCGA CTTCACGCGC
GGCCGCAAGG TCGAGGCGGC GGAGCGGCTC GGCATCGGCC GCAACACGAT CACGCGCAAG
ATCCAGGAAC TGCATCTGGA GCCTTGA
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| Protein sequence | MKPIWIVDDD QSIRWVLEKA LARDSFATKS FANVRDALAA LDHETPQVLV SDIRMPGGSG
LELLQAVHER LPDLPVIIMT AFSDLDSAVA AFQGGAFEYL AKPFDVDKAV ELIRRAVEES
LRGGAPQDER VAEAPEMLGQ APAMQDMFRA IGRLSHSAAT VLITGESGTG KELVARALHR
HSPRANGPFI ALNTAAIPKD LLESELFGHE RGAFTGAQTT RQGRFEQAEN GTLFLDEIGD
MPFDLQTRLL RVLSDGQFYR VGGHNPLRAN VRVIAATHQN LEARVRQGLF REDLYHRLNV
IRLRLPPLRE RSEDIALLTR HFLQKSARDL GVEPKRVSDD ALAYLTSLSF PGNVRQLENL
ANWLTVMAPA QTVEIKDLPP DLVPAGAPVT ATADGIDAHG GASIGGGDAL RVQPAAGAAP
LTAAPVAAAP NGAPAGYPMW ENGLRTEVAR LLRENSADVM DELARRFEAA VIREALDFTR
GRKVEAAERL GIGRNTITRK IQELHLEP
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