| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4144 |
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| Symbol | |
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| ID | 5105663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4547501 |
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| End bp | 4548934 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640505408 |
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| Product | nitrogen metabolism transcriptional regulator, NtrC, Fis family |
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| Protein accession | YP_001189623 |
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| Protein GI | 146309158 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR01818] nitrogen regulation protein NR(I) |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGCA GTGAAACCGT CTGGATTGTC GACGACGATC GTTCCATCCG CTGGGTACTG
GAAAAGGCCC TGCAACAGGA AGGCATGACC ACCCAGAGTT TCGACAGTGC CGACGGTGTA
CTCGCCCGCC TGACTCGCCA GCAGCCGGAC GTGATCATCT CCGACATCCG CATGCCCGGG
GCCAGCGGCC TCGACCTGCT GGCCCGCATC CGCGAGCTGT ACCCGCGCCT GCCGGTGATC
ATCATGACCG CGCATTCGGA CCTGGACAGT GCGGTGGCCA GCTACCAGGG CGGCGCCTTC
GAATACCTGC CCAAGCCGTT TGACGTCGAC GAAGCCGTAT CGCTGGTCAA GCGCGCCTTT
CAGCATGCCC AGGAGCAGCA GAGCCTGGCC GCGCCCGCTG CGCAGGCGCG CACCCCGGAA
ATCATCGGCG AGGCGCCGGC GATGCAGGAG GTGTTCCGCG CCATCGGCCG CCTGTCCCAC
TCCAATATCA CCGTGCTGAT CAACGGCGAA TCCGGCACCG GCAAGGAGCT GGTGGCCCAT
GCCCTGCACC GCCACAGCCC GCGAGCCGCC GCGCCCTTCA TCGCCCTGAA CATGGCGGCC
ATCCCCAAGG ACCTGATGGA GTCCGAGCTG TTCGGCCACG AGAAAGGCGC CTTCACCGGC
GCGGCCAACC AGCGCCGTGG CCGCTTCGAG CAGGCCGATG GCGGCACCCT GTTCCTCGAC
GAGATCGGCG ACATGCCGGC CGACACCCAG ACGCGCCTGC TGCGCGTGCT GGCCGATGGC
GAGTTCTACC GCGTCGGCGG CCATACCCCG GTGAAGGTGG ACGTGCGCAT CATCGCCGCT
ACCCACCAGA ACCTGGAAAC CCTGGTGCAG GCCGGCAAGT TCCGCGAAGA CCTGTTCCAC
CGCCTCAACG TCATCCGCAT CCACATTCCG CGCCTGGCCG ACCGCCGCGA GGACATCCCC
ACCCTGGCCA ACCACTTCCT CGCCCGCGCC GCCCAGGAAC TGGCGGTGGA ACCGAAGCTG
CTCAAGAGCG AGACCGAGGA TTACCTCAAG CACCTGCCCT GGCCGGGCAA CGTGCGCCAG
CTGGAGAACA CCTGCCGCTG GATCACCGTC ATGGCCTCGG GGCGCGAGGT GCATGTCGAC
GACCTGCCGC CGGAGCTGCT CACCCAGCCG CAGGACGCCG CACCGGTGAC CAATTGGGAA
CAGGCGCTGC GCCTGTGGGC CGACCAGGCC CTGGCACGCG GCCAGTCCAA CCTGCTCGAT
ACCGCCGTGC CGGCCTTCGA ACGCATCATG ATCGAGACCG CGCTCAAGCA CACCGCCGGC
CGCCGCCGCG ACGCCGCCCT GCTGCTGGGT TGGGGTCGTA ACACCCTGAC GCGCAAGATC
AAGGAGCTGG GCATGAAGGT CGACGGCGCG GACGACGACG ACAGCGACGA CTGA
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| Protein sequence | MSRSETVWIV DDDRSIRWVL EKALQQEGMT TQSFDSADGV LARLTRQQPD VIISDIRMPG
ASGLDLLARI RELYPRLPVI IMTAHSDLDS AVASYQGGAF EYLPKPFDVD EAVSLVKRAF
QHAQEQQSLA APAAQARTPE IIGEAPAMQE VFRAIGRLSH SNITVLINGE SGTGKELVAH
ALHRHSPRAA APFIALNMAA IPKDLMESEL FGHEKGAFTG AANQRRGRFE QADGGTLFLD
EIGDMPADTQ TRLLRVLADG EFYRVGGHTP VKVDVRIIAA THQNLETLVQ AGKFREDLFH
RLNVIRIHIP RLADRREDIP TLANHFLARA AQELAVEPKL LKSETEDYLK HLPWPGNVRQ
LENTCRWITV MASGREVHVD DLPPELLTQP QDAAPVTNWE QALRLWADQA LARGQSNLLD
TAVPAFERIM IETALKHTAG RRRDAALLLG WGRNTLTRKI KELGMKVDGA DDDDSDD
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