| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0352 |
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| Symbol | ntrC |
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| ID | 1181961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 384711 |
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| End bp | 386147 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637391720 |
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| Product | nitrogen regulation protein NR(I) |
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| Protein accession | NP_790201 |
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| Protein GI | 28867582 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR01818] nitrogen regulation protein NR(I) |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGTA GTGAAACTGT CTGGATCGTA GACGACGATC GTTCGATCCG CTGGGTACTG
GAAAAAGCCT TGCAACAGGA AGGCATGACC ACACAAAGCT TCGACAGCGC CGACGGGGTG
ATGAGCCGTC TGGCCCGCCA GCAACCGGAC GTGATCATTT CCGACATTCG CATGCCCGGT
GCCAGTGGTC TGGACCTGCT GGCGCGGATT CGCGAGCAGC ATCCACGTCT GCCGGTGATC
ATCATGACCG CCCATTCAGA CCTGGACAGC GCTGTGGCGT CGTATCAGGG TGGTGCTTTC
GAGTACCTGC CCAAGCCATT CGACGTTGAC GAAGCTGTCT CGCTGGTCAA GCGCGCCAAT
CAGCACGCTC AGGAACAGCA AGGCCTGGAC GTCGCACCCA CGCTGACCCG CACCCCTGAA
ATCATTGGCG AAGCGCCAGC GATGCAGGAA GTGTTTCGCG CCATCGGGCG TCTGAGCCAC
TCCAACATCA CCGTGTTGAT CAACGGCGAA TCGGGTACCG GTAAAGAACT GGTCGCTCAC
GCCCTGCACC GCCACAGCCC ACGCTCGGCT TCGCCGTTTA TTGCGCTGAA CATGGCGGCG
ATTCCGAAGG ATTTGATGGA ATCAGAGCTG TTCGGTCACG AGAAAGGTGC CTTCACCGGC
GCGGCCAACC TGCGTCGCGG TCGCTTTGAA CAGGCTGATG GCGGCACGCT GTTTCTCGAT
GAAATCGGCG ACATGCCGGC CGACACCCAG ACCCGCCTGC TGCGCGTGCT GGCCGATGGC
GAATTTTATC GGGTTGGCGG GCACACGCCG GTCAAAGTCG ATGTGCGGAT CATTGCCGCG
ACTCACCAGA ACCTGGAAAC CCTGGTGCAG GCCGGGAAAT TTCGTGAGGA CTTGTTTCAC
CGTCTGAACG TGATCCGTAT TCATATCCCG CGCATGTCGG ACCGTCGCGA AGACATCCCG
ACCCTGGCCA AACACTTCCT GAGCCGCGCC GCACAGGAAC TGGCGGTCGA ACCCAAGCTG
CTCAAGGCCG AGACCGAGGA ATACCTCAAG CATCTGCCAT GGCCGGGCAA CGTTCGACAG
CTGGAAAACA CTTGCCGCTG GATCACCGTC ATGGCCTCGG GCCGTGAAGT GCACATCAGC
GACCTGCCGC CGGAACTGCT CAGCCTGCCG CAAGACGCCG CACCGGTTAC CAACTGGGAA
CAGGCGCTGC GTCAGTGGGC CGATCAGGCG TTGTCGCGCG GTCAGTCCAG CCTGCTGGAC
AGCGCGGTGC CGACCTTCGA GCGGATCATG ATCGAAACCG CCCTCAAACA CACCGCCGGT
CGCCGCCGCG ACGCTGCTGT GCTGCTGGGA TGGGGCCGCA ACACCTTGAC CCGCAAGATC
AAGGAACTGG GCATGAAAGT CGATGGCGGG GATGACGACG AGGCTGATGA GGGCTGA
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| Protein sequence | MSRSETVWIV DDDRSIRWVL EKALQQEGMT TQSFDSADGV MSRLARQQPD VIISDIRMPG
ASGLDLLARI REQHPRLPVI IMTAHSDLDS AVASYQGGAF EYLPKPFDVD EAVSLVKRAN
QHAQEQQGLD VAPTLTRTPE IIGEAPAMQE VFRAIGRLSH SNITVLINGE SGTGKELVAH
ALHRHSPRSA SPFIALNMAA IPKDLMESEL FGHEKGAFTG AANLRRGRFE QADGGTLFLD
EIGDMPADTQ TRLLRVLADG EFYRVGGHTP VKVDVRIIAA THQNLETLVQ AGKFREDLFH
RLNVIRIHIP RMSDRREDIP TLAKHFLSRA AQELAVEPKL LKAETEEYLK HLPWPGNVRQ
LENTCRWITV MASGREVHIS DLPPELLSLP QDAAPVTNWE QALRQWADQA LSRGQSSLLD
SAVPTFERIM IETALKHTAG RRRDAAVLLG WGRNTLTRKI KELGMKVDGG DDDEADEG
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