| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0339 |
|---|
| Symbol | |
|---|
| ID | 3713367 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 382767 |
|---|
| End bp | 384203 |
|---|
| Gene Length | 1437 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | nitrogen metabolism transcriptional regulator, NtrC, Fis family |
|---|
| Protein accession | YP_346072 |
|---|
| Protein GI | 77456567 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGTA GTGAAACCGT GTGGATCGTC GATGACGACC GTTCTATCCG TTGGGTTCTG
GAAAAAGCCC TGCAACAGGA AGGCATGACC ACCCAGAGCT TCGACAGTGC CGATGGCGTG
ATGAGCCGCC TCGCGCGCCA GCAGCCGGAC GTGATCATCT CCGACATCCG CATGCCCGGC
GCCAGTGGCC TGGACCTGCT GGCACGGATC CGCGAGCAGC ACCCGCGGCT GCCGGTGATC
ATCATGACCG CTCATTCCGA TCTGGACAGC GCTGTCGCCT CCTATCAGGG TGGCGCGTTC
GAATACCTGC CCAAGCCGTT CGACGTCGAC GAAGCCGTGT CGCTGGTCAA GCGCGCCAAT
CAGCACGCCC AGGAACAGCA AGGTCTGGAA GTCGCGCCAG CGCTGACCCG CACCCCGGAA
ATCATCGGCG AAGCGCCGGC GATGCAGGAA GTGTTTCGCG CCATCGGGCG CCTGAGCCAC
TCCAACATCA CCGTGCTGAT CAACGGCGAA TCCGGCACCG GTAAAGAACT GGTGGCCCAC
GCCCTGCACC GCCACAGCCC GCGCGCGGCC TCGCCGTTCA TCGCGCTGAA CATGGCGGCG
ATTCCGAAAG ACCTGATGGA ATCCGAGCTG TTCGGCCATG AAAAAGGCGC GTTCACCGGT
GCGGCCAACC TGCGTCGTGG CCGTTTCGAA CAGGCCGACG GCGGCACGCT GTTCCTCGAT
GAAATCGGCG ACATGCCGGC GGACACCCAG ACTCGCCTGC TGCGGGTGCT GGCCGATGGC
GAGTTCTATC GCGTTGGCGG GCACGTGCCG GTCAAAGTCG ATGTGCGGAT CATCGCCGCA
ACGCACCAGA ATCTGGAAAC CCTGGTTCAC GCCGGGAAAT TCCGTGAGGA CTTGTTCCAC
CGCCTCAACG TGATCCGCAT CCACATCCCT CGCCTGTCGG ACCGTCGCGA AGACATCCCG
ACCCTGGCCA AGCACTTCCT CAGCCGCGCC GCGCAAGAGC TGGCGGTGGA GCCGAAGCTG
CTGAAAAGCG AGACCGAGGA ATACCTGAAG AACCTGCCGT GGCCAGGCAA CGTGCGGCAG
CTGGAAAACA CCTGCCGCTG GATCACCGTA ATGGCCTCCG GGCGCGAAGT GCACATCAGC
GACCTGCCGC CGGAACTGCT GAGCCTGCCG CAGGACTCGG CGCCGGTCAC CAACTGGGAA
CAGGCGCTGC GACAGTGGGC CGATCAGGCC CTGGCGCGCG GTCAGTCGAG CCTGCTCGAC
AGCGCGGTGC CGGCGTTCGA GCGAATCATG ATCGAGACAG CACTGAAGCA CACCGCCGGA
CGTCGTCGCG ACGCGGCCGT GCTACTGGGC TGGGGCCGGA ACACCTTGAC CCGCAAGATC
AAGGAACTCG GCATGAAGGT CGATGGCGGG GATGACGATG AGGGCGATGA AGGCTGA
|
|---|
| Protein sequence | MSRSETVWIV DDDRSIRWVL EKALQQEGMT TQSFDSADGV MSRLARQQPD VIISDIRMPG
ASGLDLLARI REQHPRLPVI IMTAHSDLDS AVASYQGGAF EYLPKPFDVD EAVSLVKRAN
QHAQEQQGLE VAPALTRTPE IIGEAPAMQE VFRAIGRLSH SNITVLINGE SGTGKELVAH
ALHRHSPRAA SPFIALNMAA IPKDLMESEL FGHEKGAFTG AANLRRGRFE QADGGTLFLD
EIGDMPADTQ TRLLRVLADG EFYRVGGHVP VKVDVRIIAA THQNLETLVH AGKFREDLFH
RLNVIRIHIP RLSDRREDIP TLAKHFLSRA AQELAVEPKL LKSETEEYLK NLPWPGNVRQ
LENTCRWITV MASGREVHIS DLPPELLSLP QDSAPVTNWE QALRQWADQA LARGQSSLLD
SAVPAFERIM IETALKHTAG RRRDAAVLLG WGRNTLTRKI KELGMKVDGG DDDEGDEG
|
|---|
| |