| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1148 |
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| Symbol | |
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| ID | 5108121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1293159 |
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| End bp | 1293890 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640502372 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001186647 |
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| Protein GI | 146306182 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000285872 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.61114 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAGTCAGG CCGGAAAATC CATTCTGCTG GTGGACGACG ACCAGGAAAT TCGCGAACTG
CTCGACACCT ACCTGAGCCG CGCGGGCTTC GCCGTGCGCG CCGTGGCGGA CGGTGAAGGC
CTGCGCGCCG CGCTGGTGGA GGAGCCGGCG GATCTGGTGA TTCTCGACGT GATGCTGCCG
GACGAGGACG GTTTCAGCCT GTGCCGCTGG ATACGCGAGC ATCAGCGCTT CGCCGCGGTG
CCGGTGATCA TGCTCACCGC CAGCTCCGAT GAGGCCGACC GGGTGATCGG CCTGGAGCTG
GGCGCCGACG ATTATCTCGG CAAGCCGTTC AGCCCGCGCG AGCTGCTGGC GCGGATCAAG
GCGCTGCTGC GCCGCGCCAG CTTCGCCAAG GAGCCGGCTG CCAGCGAAGT GCTGGCGTTC
GGCGAGTGGC GCCTGGACAT GATCAGCCAC CGCCTCTTTC ACCAGGACGG CGAGGAGGTG
ATTCTCTCCG GCGCCGACTT CGCCCTGCTC AAGCTGTTTC TCGACCGCCC CCAGCAGATT
CTCGATCGCG ACACCATCGC CAGCGTCACC CGTGGTCGCG AGGTGATGCC GCTGGAGCGC
ATCGTCGACA TGGCGGTCAG CCGGCTGCGT CAGCGTCTGC GTGACACCGA CAAACCGCCG
CGGCTGATCC GCACCGTGCG CGGCGCCGGC TACCTGCTGG CGGCCCACGT CACGCCTGGC
AGCCATGGCT AA
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| Protein sequence | MSQAGKSILL VDDDQEIREL LDTYLSRAGF AVRAVADGEG LRAALVEEPA DLVILDVMLP
DEDGFSLCRW IREHQRFAAV PVIMLTASSD EADRVIGLEL GADDYLGKPF SPRELLARIK
ALLRRASFAK EPAASEVLAF GEWRLDMISH RLFHQDGEEV ILSGADFALL KLFLDRPQQI
LDRDTIASVT RGREVMPLER IVDMAVSRLR QRLRDTDKPP RLIRTVRGAG YLLAAHVTPG
SHG
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