Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0415 |
Symbol | |
ID | 6109323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 448554 |
End bp | 449990 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641620172 |
Product | nitrogen metabolism transcriptional regulator, NtrC, Fis family |
Protein accession | YP_001747290 |
Protein GI | 170719602 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR01818] nitrogen regulation protein NR(I) |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.855382 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGAA GTGAAACCGT ATGGATCGTC GACGATGATC GCTCCATCCG CTGGGTCCTG GAAAAAGCCC TGCAACAGGA GGGCATGACC ACCCAGAGCT TCGACAGCGC CGATGGCGTG ATGGGCCGCC TGGCCCGGCA GCAGCCGGAC GTGATCATTT CCGACATTCG CATGCCCGGC GCCAGCGGCC TCGACCTGCT GGCACAGATT CGCGACCAAC ACCCGCGCCT GCCGGTCATC ATCATGACCG CCCATTCGGA CCTGGACAGC GCAGTGGCGT CGTACCAAGG GGGCGCTTTC GAGTACCTGC CCAAACCGTT CGATGTCGAT GAGGCGGTCT CGCTGGTCAA GCGCGCCAAC CAGCATGCGC AGGAACAGCA AGGCCTCGAT GTACCTCAGG CCCTGGCCCG TACGCCGGAA ATCATCGGTG AAGCCCCGGC GATGCAGGAG GTGTTCCGCG CCATTGGCCG GCTGAGCCAC TCCAACATCA CCGTACTGAT CAATGGCGAG TCGGGTACCG GTAAGGAGCT GGTGGCCCAC GCCCTGCATC GCCACAGCCC GCGGGCTGCC TCACCGTTCA TTGCCCTGAA CATGGCCGCC ATTCCCAAGG ACCTGATGGA GTCGGAGCTG TTCGGCCACG AAAAAGGCGC CTTTACCGGT GCGGCCAACC TGCGGCGCGG CCGCTTCGAG CAAGCGGACG GCGGCACCTT GTTCCTCGAC GAAATCGGTG ACATGCCTGC CGATACGCAG ACCCGCCTGC TGCGTGTGCT GGCCGATGGC GAGTTCTATC GTGTGGGCGG TCATGTGCCC GTAAAGGTCG ATGTGCGAAT AATCGCTGCG ACCCATCAAA ATCTCGAGTC ACTGGTACAG GCTGGCAAGT TCCGTGAAGA CTTGTTCCAT CGCCTGAACG TAATCCGTAT TCATATCCCG CGCCTGGCCG ACCGCCGCGA GGACATCCCT GCACTGGCCC GCCACTTCCT TGGCCGCGCT GCTCAGGAGC TGGCCGTCGA ACCGAAGCTG CTCAAGCCGG AAACCGAAGA ATTCATCCGC AACCTGCCTT GGCCTGGCAA CGTCCGCCAG CTGGAAAACA CCTGCCGCTG GATCACCGTC ATGGCCTCCA GCCGCGAAGT GCTGATCGGC GACCTGCCAC CGGAATTGCT CAACCTGCCG CAAGACGCTG CACCGGTGAC CAACTGGGAG CAGGCGCTAC GCCAATGGGC CGACCAGGCC TTGGCACGCG GGCAGTCCAA CCTGCTCGAC AGCGCCGTGC CCAGCTTTGA ACGGATCATG ATCGAGACGG CGCTCAAGCA TACTGCCGGG CGTCGCCGGG ATGCAGCGGT GCTGCTGGGG TGGGGGCGCA ATACCCTGAC TCGCAAGATC AAGGAACTGG GGATGAACGT GGATGGCGGG GATGACGATG AGGGCGATGA TCACTGA
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Protein sequence | MSRSETVWIV DDDRSIRWVL EKALQQEGMT TQSFDSADGV MGRLARQQPD VIISDIRMPG ASGLDLLAQI RDQHPRLPVI IMTAHSDLDS AVASYQGGAF EYLPKPFDVD EAVSLVKRAN QHAQEQQGLD VPQALARTPE IIGEAPAMQE VFRAIGRLSH SNITVLINGE SGTGKELVAH ALHRHSPRAA SPFIALNMAA IPKDLMESEL FGHEKGAFTG AANLRRGRFE QADGGTLFLD EIGDMPADTQ TRLLRVLADG EFYRVGGHVP VKVDVRIIAA THQNLESLVQ AGKFREDLFH RLNVIRIHIP RLADRREDIP ALARHFLGRA AQELAVEPKL LKPETEEFIR NLPWPGNVRQ LENTCRWITV MASSREVLIG DLPPELLNLP QDAAPVTNWE QALRQWADQA LARGQSNLLD SAVPSFERIM IETALKHTAG RRRDAAVLLG WGRNTLTRKI KELGMNVDGG DDDEGDDH
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