| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3966 |
|---|
| Symbol | |
|---|
| ID | 3911773 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 4530407 |
|---|
| End bp | 4531243 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637885870 |
|---|
| Product | response regulator receiver domain-containing protein |
|---|
| Protein accession | YP_487570 |
|---|
| Protein GI | 86751074 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.537715 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCC CGAGAATCCT GATAGCGGAC GACGACCCGG GAGTTCTGGC GGCACTGTCG
ACGCGCTGCA AGAAGATGGG CTTCGAGGTC GACACCGCGC ACAACGGCAT GCAGATGCTG
CTGAAGGCGC GTCGGACGGC GCCGGATCTG ATGATCGTCG ACGTCAACAT GCCGAAACTG
GATGGGCTGA CCGCATCCTG CCATCTGCTC GAGCCCGGTG GTCCGCCGAT GGACGTCATC
GTCGTCAGCG GGATTTCCAG CGAGGAGACG CTCGAGCGCT GTGAGGCCCT CGGGATGTTC
TACGCCTGCA AACAAGCCGA GTTCTGGCGG GATATCAGCA AGGCGCTGAC CGAGATATTT
CCGCACATGG CGGCGACGAT CGCAGCGCAG GCGGGTCCAA TGGCCGGGGC GCCCGACGTC
GTGCCGAGTC GCCCGCGGGT GCTGATCGTC GATGACGACG AGGAGATCGG GATCTTTTTG
ACGAGCAGGC TGAAGAAGAT CGGGATCGAG GTGTTGTACG CGTCCAATGC CGGCCGCGCG
CTTCGCCTCG CGGTCTGGCA CTATCCGAGT TTGATCGTCA CAGATTTCAG TATGCCCGAC
GGAGATGCCG GCTTGTTGCT CTCGAGGTTG CGGAGCTATC CCGCGACGGC TGCGATTCCG
GTCGTCGTGC TGAGCGGCAA GGATATCGAC GAGCCGACCT CGAAGATGCT GAAGCGCGAA
GTGATGGGCC ACGCCGGCGC CATCAAGATC GTCAAGAAGT CCTTCGACGT CAGCGAATTG
TTCGACACGA TCCAGGAGTA TTGCTCGGCC GAGCCGAGTG CGGTTGTCGG ACGGTGA
|
|---|
| Protein sequence | MSAPRILIAD DDPGVLAALS TRCKKMGFEV DTAHNGMQML LKARRTAPDL MIVDVNMPKL
DGLTASCHLL EPGGPPMDVI VVSGISSEET LERCEALGMF YACKQAEFWR DISKALTEIF
PHMAATIAAQ AGPMAGAPDV VPSRPRVLIV DDDEEIGIFL TSRLKKIGIE VLYASNAGRA
LRLAVWHYPS LIVTDFSMPD GDAGLLLSRL RSYPATAAIP VVVLSGKDID EPTSKMLKRE
VMGHAGAIKI VKKSFDVSEL FDTIQEYCSA EPSAVVGR
|
|---|
| |