| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0247 |
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| Symbol | |
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| ID | 5197541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 252861 |
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| End bp | 254318 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640579787 |
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| Product | nitrogen metabolism transcriptional regulator, NtrC, Fis family |
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| Protein accession | YP_001260756 |
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| Protein GI | 148553174 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR01818] nitrogen regulation protein NR(I) |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.898521 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0558214 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGAA CCGGGGGCAG GGTCCTGGTC GTCGACGACG ACGGCGCCAT CCGCACCGTG
GTGCGCGAGG CGCTGCGCCG CGCCGGCCAT ATCGTCGAGA CGGCGGCCTC GGTCGCCGAG
CAGCGCCGGC TGTTCGCCAG CTTCGATCCG CAGGTGCTCG TCACCGACGT GATCCTGCCC
GACGGCAACG GGCTCGACAT CATCCCGGAG ATGCTCCGCA CCAATCCCGG CCTGCCGGTG
ATCGTGCTGT CGGCGCAGAA CACCTTCACC ACGGCGCTGC GCGCGACCGA GCAGGGGGCG
TTCGACTATC TGCCCAAGCC GTTCGACCTG GGCGAGCTGA CCCGCGCCGT GTCCGATGCG
CTGGCGGCGC GGGCGGGCGG CGGCGCGGCG GCGTTCGACG GCGAGGCGGC CGAGGACCTG
CCGCTGATCG GCCGGTCGCC GCCGATGCAG GAGGTCTACC GCACCATCGC GCGCGTCGTC
GCTAACGACC TGACCGTGCT GGTGCTGGGC GAATCGGGCA CCGGCAAGGA ACTGGTCGCG
CGCGCCATCC ACGATTTCGG GCCACGCGCC GCGGCGCCCT TCGTCGCGAT CAACATGGCG
GCTATCCCGC GCGAGCTGAT CGAATCCGAG CTGTTCGGCC ATGAGCGCGG GGCCTTCACC
GGCGCGCAGG CGCGCAGCGC CGGCCGCTTC GAGCAGGCGC AGGGCGGCAC GTTGTTCCTC
GACGAGATCG GCGACATGCC GATGGAGGCG CAGACCCGGC TGCTCCGCGT CCTCCAGGCG
GGCGAGTTCA CCACGGTCGG CGGCACCCGC TCGATCCGCG CCGACGTCCG CATCATCGCC
GCCACCCACA AGGACCTGCC CAGGCTGATC GCCGACGGCG GCTTCCGCGA GGACCTCTAT
TACCGCCTCA ACGTCGTGCC GATCCGCCTG CCGGCGTTGC GCCAGCGCGG CGACGACATC
GGCGAGCTGG CGCGCTTCTT CCTCGACCGG GCGGCGGCGG ACGGGCTGCC GCGCAAGGCG
CTCGACGCGG GCGCGGTCGC GCGGCTCATC CAGCATGGCT GGCCCGGCAA CGTCCGCGAG
CTCGAGAATC TGATGCGCCG CCTGGCGGTG CTCAGCCGCG AGGACGTGAT CACCGCCGCG
CTGGTCGAGC AGCAGCTCCA CCAGCGCCCG GCGGCCGACG TTCCACCGCC CGTACCGGCG
GGCAGCGGCG GCCTCGCCGA TGCCGTCGAG CAGCACCTCG CCCGCTATTT CACGACCTTC
GGCCGCGAGC TGCCGCCCGA CGGGCTCTAC GACCGGGTGC TGGCCGAGGT CGAGCGGCCG
CTGCTCGAAC TCAGCATGGC GGCGGCCAAG GGCAACCAGC TCCGCGCCGC GCGGCTGCTG
GGGATCAACC GCAACACCCT GCGCAAGAAG CTGACTGACC TCGGGATCGA TGCGGGGGCC
TCGCGCCGGG CGGATTGA
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| Protein sequence | MTGTGGRVLV VDDDGAIRTV VREALRRAGH IVETAASVAE QRRLFASFDP QVLVTDVILP
DGNGLDIIPE MLRTNPGLPV IVLSAQNTFT TALRATEQGA FDYLPKPFDL GELTRAVSDA
LAARAGGGAA AFDGEAAEDL PLIGRSPPMQ EVYRTIARVV ANDLTVLVLG ESGTGKELVA
RAIHDFGPRA AAPFVAINMA AIPRELIESE LFGHERGAFT GAQARSAGRF EQAQGGTLFL
DEIGDMPMEA QTRLLRVLQA GEFTTVGGTR SIRADVRIIA ATHKDLPRLI ADGGFREDLY
YRLNVVPIRL PALRQRGDDI GELARFFLDR AAADGLPRKA LDAGAVARLI QHGWPGNVRE
LENLMRRLAV LSREDVITAA LVEQQLHQRP AADVPPPVPA GSGGLADAVE QHLARYFTTF
GRELPPDGLY DRVLAEVERP LLELSMAAAK GNQLRAARLL GINRNTLRKK LTDLGIDAGA
SRRAD
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