Gene Dret_0870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0870 
Symbol 
ID8418689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1028438 
End bp1028791 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content57% 
IMG OID645037439 
Productresponse regulator receiver protein 
Protein accessionYP_003197739 
Protein GI258404997 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.226165 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.635424 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCACA AGATTATGAT CGTTGACGAC GATCCGGAAA TTGTCAGCTA CCTCAAAGAA 
CTGCTGGAAG ACAACGGCTA CGCGACCTGT GTGGCCACTG ACGGCAGCCA GGCCCTGGAC
ATCGTCCGCC AGGAAAATCC GGACCTGATC ACCCTGGATT TGGAAATGCC CGACGAGTGG
GGACCGCGCT TTTACCGGCG TTTGAGTCAG CACGACGCAT TGCGGTCCAT CCCGGTTATC
GTCATCAGTG GCCTTTCCGG CAGCAAATAC GCCATCCCCC GGGCCGTGGC CAGTTTGAAC
AAGCCGTTTG ACAAAGACGA GTTGCTGCGC CTGATCACTC AGACATTGGG CTGA
 
Protein sequence
MSHKIMIVDD DPEIVSYLKE LLEDNGYATC VATDGSQALD IVRQENPDLI TLDLEMPDEW 
GPRFYRRLSQ HDALRSIPVI VISGLSGSKY AIPRAVASLN KPFDKDELLR LITQTLG