More than 300 homologs were found in PanDaTox collection
for query gene GM21_2817 on replicon NC_012918
Organism: Geobacter sp. M21



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012918  GM21_2817  formate dehydrogenase family accessory protein FdhD  100 
 
 
255 aa  513  1e-144  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_1437  formate dehydrogenase family accessory protein FdhD  90.59 
 
 
255 aa  474  1e-133  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2076  formate dehydrogenase, subunit FdhD  70.56 
 
 
263 aa  372  1e-102  Geobacter metallireducens GS-15  Bacteria  hitchhiker  9.82479e-16  normal 
 
 
-
 
NC_009483  Gura_3385  formate dehydrogenase family accessory protein FdhD  62.5 
 
 
483 aa  335  5.999999999999999e-91  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2264  formate dehydrogenase family accessory protein FdhD  64.82 
 
 
468 aa  330  2e-89  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3370  formate dehydrogenase family accessory protein FdhD  64.8 
 
 
487 aa  330  2e-89  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1958  formate dehydrogenase family accessory protein FdhD  64.03 
 
 
468 aa  327  8e-89  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007517  Gmet_1062  formate dehydrogenase, subunit FdhD  60.78 
 
 
479 aa  310  1e-83  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.0656292 
 
 
-
 
NC_002939  GSU0780  formate dehydrogenase accessory protein FdhD  57.6 
 
 
478 aa  289  3e-77  Geobacter sulfurreducens PCA  Bacteria  normal  0.162723  n/a   
 
 
-
 
NC_011146  Gbem_1293  formate dehydrogenase family accessory protein FdhD  56 
 
 
255 aa  286  2.9999999999999996e-76  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.0000222407  n/a   
 
 
-
 
NC_012918  GM21_2990  formate dehydrogenase family accessory protein FdhD  55.38 
 
 
255 aa  280  2e-74  Geobacter sp. M21  Bacteria  n/a    hitchhiker  3.68227e-19 
 
 
-
 
NC_013525  Tter_0989  formate dehydrogenase family accessory protein FdhD  38.02 
 
 
266 aa  179  4e-44  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009632  SaurJH1_2347  formate dehydrogenase accessory protein  34.8 
 
 
265 aa  171  1e-41  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_2305  formate dehydrogenase accessory protein  34.8 
 
 
265 aa  171  1e-41  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS3364  formate dehydrogenase accessory protein  32.41 
 
 
265 aa  157  1e-37  Bacillus anthracis str. Sterne  Bacteria  normal  0.144836  n/a   
 
 
-
 
NC_007530  GBAA_3628  formate dehydrogenase accessory protein  32.41 
 
 
265 aa  157  1e-37  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_3578  formate dehydrogenase accessory protein  32.41 
 
 
265 aa  157  1e-37  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005957  BT9727_3328  formate dehydrogenase accessory protein  32.41 
 
 
265 aa  156  3e-37  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0183588  n/a   
 
 
-
 
NC_006274  BCZK3278  formate dehydrogenase accessory protein  32.02 
 
 
265 aa  155  4e-37  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0715  formate dehydrogenase accessory protein  32.18 
 
 
268 aa  155  7e-37  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_3585  formate dehydrogenase accessory protein  31.62 
 
 
265 aa  154  1e-36  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A3678  formate dehydrogenase accessory protein  32.02 
 
 
265 aa  154  2e-36  Bacillus cereus B4264  Bacteria  normal  0.688402  n/a   
 
 
-
 
NC_011658  BCAH187_A3595  formate dehydrogenase accessory protein  31.62 
 
 
265 aa  154  2e-36  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4711  formate dehydrogenase accessory protein  32.05 
 
 
268 aa  153  2e-36  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_2876  formate dehydrogenase family accessory protein FdhD  33.2 
 
 
262 aa  153  2.9999999999999998e-36  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0487293  n/a   
 
 
-
 
NC_005945  BAS0556  formate dehydrogenase accessory protein  32.94 
 
 
268 aa  153  2.9999999999999998e-36  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0498  formate dehydrogenase accessory protein  32.94 
 
 
268 aa  153  2.9999999999999998e-36  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0588  formate dehydrogenase accessory protein  32.94 
 
 
268 aa  153  2.9999999999999998e-36  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0644  formate dehydrogenase accessory protein  32.94 
 
 
268 aa  153  2.9999999999999998e-36  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_003909  BCE_0654  formate dehydrogenase accessory protein  32.05 
 
 
268 aa  152  4e-36  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0500  formate dehydrogenase accessory protein  32.94 
 
 
268 aa  152  4e-36  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0501  formate dehydrogenase accessory protein  32.16 
 
 
268 aa  152  4e-36  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0626  formate dehydrogenase accessory protein  32.05 
 
 
268 aa  152  5e-36  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011832  Mpal_1216  formate dehydrogenase family accessory protein FdhD  38.55 
 
 
261 aa  150  1e-35  Methanosphaerula palustris E1-9c  Archaea  normal  0.944709  normal  0.100536 
 
 
-
 
NC_007498  Pcar_1840  formate dehydrogenase accessory protein  32.3 
 
 
268 aa  149  3e-35  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00380429  n/a   
 
 
-
 
NC_009674  Bcer98_0504  formate dehydrogenase accessory protein  31.35 
 
 
269 aa  149  4e-35  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_3374  formate dehydrogenase family accessory protein FdhD  31.73 
 
 
260 aa  146  3e-34  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_2175  formate dehydrogenase family accessory protein FdhD  33.33 
 
 
260 aa  145  6e-34  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.145342 
 
 
-
 
NC_010718  Nther_2277  formate dehydrogenase family accessory protein FdhD  34.16 
 
 
258 aa  139  3.9999999999999997e-32  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.181166  normal 
 
 
-
 
NC_013205  Aaci_1923  formate dehydrogenase family accessory protein FdhD  36.65 
 
 
280 aa  136  3.0000000000000003e-31  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1343  formate dehydrogenase accessory protein  30.4 
 
 
263 aa  135  6.0000000000000005e-31  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008554  Sfum_1205  formate dehydrogenase family accessory protein FdhD  34.75 
 
 
303 aa  135  6.0000000000000005e-31  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.495294 
 
 
-
 
NC_011830  Dhaf_1033  formate dehydrogenase family accessory protein FdhD  31.54 
 
 
266 aa  134  9.999999999999999e-31  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0364714  n/a   
 
 
-
 
NC_012793  GWCH70_0466  formate dehydrogenase accessory protein  28 
 
 
262 aa  134  1.9999999999999998e-30  Geobacillus sp. WCH70  Bacteria  normal  0.276769  n/a   
 
 
-
 
NC_013173  Dbac_1058  formate dehydrogenase family accessory protein FdhD  36.84 
 
 
264 aa  134  1.9999999999999998e-30  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_06930  formate dehydrogenase family accessory protein FdhD  32.78 
 
 
297 aa  134  1.9999999999999998e-30  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.215671 
 
 
-
 
NC_008346  Swol_1030  formate dehydrogenase accessory protein  31.87 
 
 
263 aa  130  2.0000000000000002e-29  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_2451  formate dehydrogenase family accessory protein FdhD  32.68 
 
 
281 aa  129  6e-29  Eggerthella lenta DSM 2243  Bacteria  normal  0.0979035  normal 
 
 
-
 
NC_013132  Cpin_4073  formate dehydrogenase family accessory protein FdhD  31.37 
 
 
280 aa  128  8.000000000000001e-29  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.110434  normal  0.0860258 
 
 
-
 
NC_013512  Sdel_2060  formate dehydrogenase family accessory protein FdhD  31.95 
 
 
262 aa  126  4.0000000000000003e-28  Sulfurospirillum deleyianum DSM 6946  Bacteria  decreased coverage  0.0000863556  n/a   
 
 
-
 
NC_014212  Mesil_2130  formate dehydrogenase family accessory protein FdhD  34.26 
 
 
283 aa  126  4.0000000000000003e-28  Meiothermus silvanus DSM 9946  Bacteria  normal  0.455912  normal  0.581272 
 
 
-
 
NC_009802  CCC13826_0211  formate dehydrogenase accessory protein  29.79 
 
 
260 aa  124  2e-27  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_009707  JJD26997_1860  formate dehydrogenase accessory protein  28.74 
 
 
260 aa  123  2e-27  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  n/a   
 
 
-
 
NC_009712  Mboo_2122  formate dehydrogenase family accessory protein FdhD  31.93 
 
 
259 aa  123  3e-27  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.545765  normal 
 
 
-
 
NC_013517  Sterm_4115  formate dehydrogenase family accessory protein FdhD  28.8 
 
 
255 aa  123  3e-27  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.271618  n/a   
 
 
-
 
NC_011772  BCG9842_B1639  formate dehydrogenase accessory protein  30.91 
 
 
223 aa  122  4e-27  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_008787  CJJ81176_1500  formate dehydrogenase accessory protein  28.97 
 
 
260 aa  122  7e-27  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  0.919736  n/a   
 
 
-
 
NC_003912  CJE1681  formate dehydrogenase accessory protein  28.97 
 
 
260 aa  121  9.999999999999999e-27  Campylobacter jejuni RM1221  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A0620  formate dehydrogenase accessory protein  34.47 
 
 
288 aa  120  1.9999999999999998e-26  Ralstonia eutropha JMP134  Bacteria  normal  0.979772  n/a   
 
 
-
 
NC_011886  Achl_3467  formate dehydrogenase family accessory protein FdhD  32.56 
 
 
294 aa  118  7.999999999999999e-26  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009051  Memar_1911  formate dehydrogenase family accessory protein FdhD  34.48 
 
 
249 aa  118  9.999999999999999e-26  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_011145  AnaeK_0873  formate dehydrogenase family accessory protein FdhD  34.6 
 
 
288 aa  117  1.9999999999999998e-25  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_0556  formate dehydrogenase accessory protein  31.03 
 
 
281 aa  117  1.9999999999999998e-25  Cupriavidus metallidurans CH34  Bacteria  normal  0.152789  normal  0.415785 
 
 
-
 
NC_011726  PCC8801_0758  formate dehydrogenase family accessory protein FdhD  30.48 
 
 
299 aa  117  1.9999999999999998e-25  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013093  Amir_1157  formate dehydrogenase family accessory protein FdhD  31.25 
 
 
274 aa  117  1.9999999999999998e-25  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_0784  formate dehydrogenase family accessory protein FdhD  30.48 
 
 
299 aa  116  3e-25  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_007796  Mhun_2204  formate dehydrogenase family accessory protein FdhD  30.52 
 
 
254 aa  116  3e-25  Methanospirillum hungatei JF-1  Archaea  normal  0.154366  normal  0.450296 
 
 
-
 
NC_008148  Rxyl_0145  formate dehydrogenase family accessory protein FdhD  33.78 
 
 
289 aa  116  3.9999999999999997e-25  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_2010  formate dehydrogenase family accessory protein FdhD  32.22 
 
 
248 aa  115  6e-25  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.068526  n/a   
 
 
-
 
NC_008781  Pnap_0839  formate dehydrogenase, subunit FdhD  30.74 
 
 
290 aa  115  6.9999999999999995e-25  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.145713  normal 
 
 
-
 
NC_010506  Swoo_4819  formate dehydrogenase subunit FdhD  29.76 
 
 
298 aa  115  8.999999999999998e-25  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_2593  formate dehydrogenase accessory protein  30.56 
 
 
278 aa  114  1.0000000000000001e-24  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_0053  formate dehydrogenase, subunit FdhD  29.8 
 
 
281 aa  114  1.0000000000000001e-24  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A1176  putative fdhD protein  29.22 
 
 
299 aa  114  1.0000000000000001e-24  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.108793 
 
 
-
 
NC_007908  Rfer_3256  formate dehydrogenase, subunit FdhD  32.63 
 
 
280 aa  113  2.0000000000000002e-24  Rhodoferax ferrireducens T118  Bacteria  normal  0.340615  n/a   
 
 
-
 
NC_011891  A2cp1_0877  formate dehydrogenase family accessory protein FdhD  34.36 
 
 
288 aa  114  2.0000000000000002e-24  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_4473  formate dehydrogenase family accessory protein FdhD  31.05 
 
 
276 aa  114  2.0000000000000002e-24  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.979472  n/a   
 
 
-
 
NC_009457  VC0395_A1126  formate dehydrogenase accessory protein  29.05 
 
 
337 aa  112  5e-24  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_3478  formate dehydrogenase family accessory protein FdhD  31.76 
 
 
292 aa  112  5e-24  Xanthobacter autotrophicus Py2  Bacteria  normal  0.739751  normal  0.474196 
 
 
-
 
NC_011004  Rpal_0806  formate dehydrogenase accessory protein  27.56 
 
 
276 aa  112  7.000000000000001e-24  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_1855  formate dehydrogenase family accessory protein FdhD  30.22 
 
 
275 aa  111  1.0000000000000001e-23  Nakamurella multipartita DSM 44233  Bacteria  normal  0.121584  normal  0.0332237 
 
 
-
 
NC_007575  Suden_0817  formate dehydrogenase accessory protein  28.35 
 
 
276 aa  111  1.0000000000000001e-23  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.0766349  n/a   
 
 
-
 
NC_009952  Dshi_3282  putative formate dehydrogenase accessory protein FdhD  32.1 
 
 
294 aa  111  1.0000000000000001e-23  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.610509  normal 
 
 
-
 
NC_011662  Tmz1t_0200  formate dehydrogenase family accessory protein FdhD  30.56 
 
 
272 aa  111  1.0000000000000001e-23  Thauera sp. MZ1T  Bacteria  normal  0.754057  n/a   
 
 
-
 
NC_008577  Shewana3_3910  formate dehydrogenase accessory protein FdhD, putative  28.17 
 
 
298 aa  110  1.0000000000000001e-23  Shewanella sp. ANA-3  Bacteria  normal  0.131875  normal 
 
 
-
 
NC_009664  Krad_3339  formate dehydrogenase family accessory protein FdhD  32.69 
 
 
297 aa  110  2.0000000000000002e-23  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.224084 
 
 
-
 
NC_009831  Ssed_4427  formate dehydrogenase, subunit FdhD  28 
 
 
295 aa  110  2.0000000000000002e-23  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009621  Smed_5485  formate dehydrogenase family accessory protein FdhD  29.88 
 
 
290 aa  110  2.0000000000000002e-23  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_1909  formate dehydrogenase, subunit FdhD  30.77 
 
 
300 aa  110  2.0000000000000002e-23  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_0406  formate dehydrogenase family accessory protein FdhD  27.34 
 
 
284 aa  110  2.0000000000000002e-23  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_3714  formate dehydrogenase, subunit FdhD  28.74 
 
 
298 aa  110  2.0000000000000002e-23  Shewanella sp. MR-4  Bacteria  normal  0.272943  normal  0.525322 
 
 
-
 
NC_004347  SO_4503  formate dehydrogenase accessory protein FdhD, putative  29.76 
 
 
249 aa  110  3e-23  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013172  Bfae_29960  formate dehydrogenase family accessory protein FdhD  30.66 
 
 
290 aa  110  3e-23  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_3785  formate dehydrogenase, subunit FdhD  28.24 
 
 
298 aa  109  5e-23  Shewanella sp. MR-7  Bacteria  normal  0.0292467  normal  0.549187 
 
 
-
 
NC_010717  PXO_00469  formate dehydrogenase accessory protein  30.83 
 
 
273 aa  108  7.000000000000001e-23  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0885199  n/a   
 
 
-
 
NC_013169  Ksed_15020  formate dehydrogenase family accessory protein FdhD  31.47 
 
 
281 aa  108  7.000000000000001e-23  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.503102  normal 
 
 
-
 
NC_008942  Mlab_0990  hypothetical protein  31.56 
 
 
506 aa  108  8.000000000000001e-23  Methanocorpusculum labreanum Z  Archaea  normal  normal  0.663742 
 
 
-
 
NC_007955  Mbur_0280  formate dehydrogenase family accessory protein FdhD  28.33 
 
 
282 aa  108  8.000000000000001e-23  Methanococcoides burtonii DSM 6242  Archaea  normal  0.717981  n/a   
 
 
-
 
NC_009484  Acry_0838  formate dehydrogenase family accessory protein FdhD  31.78 
 
 
275 aa  107  1e-22  Acidiphilium cryptum JF-5  Bacteria  normal  0.0377992  n/a   
 
 
-
 
NC_009783  VIBHAR_02271  hypothetical protein  28 
 
 
276 aa  108  1e-22  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
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