Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJJ81176_1500 |
Symbol | fdhD |
ID | 4682203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
Kingdom | Bacteria |
Replicon accession | NC_008787 |
Strand | - |
Start bp | 1421922 |
End bp | 1422704 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 639854226 |
Product | formate dehydrogenase accessory protein |
Protein accession | YP_001001155 |
Protein GI | 121613024 |
COG category | [C] Energy production and conversion |
COG ID | [COG1526] Uncharacterized protein required for formate dehydrogenase activity |
TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.919736 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATCCGT TATTTACAAC TCAAATTTTA AAATATAAAG GCAATGAATC TTTTACATGT GATGATACTT TAGTGCGTGA AATTAAGCTT GAAATTTTTA TTAATGATGA AAAAGTAGGT GCTTTAATGG CAACTCCTGT AGATGAACAG GCATTAGCAA TAGGATATTT AATGAGTGAA AATATCATTG CGAAAGTAAG TGATATTGAG AGTATAGAAA CAAAAGATGA TGGTATGAGT GTGCATATTA AAGCAAAGAT TGATAAAGAA AATTTAGCAA AGCTTAATGC TGAAGGTGTA GTTATAAGTG GTTGTGGTAG AGCACATACT GCAAATATCG ATCCAGAAGC CATTGAAGCG AGTAAAATTA GTTCTGATGC AAAATTTAGC AAAGGTGAAA TTTTAAAACA AATGAGTACT TTTTATACTC AATGCGAGCT TTACGAGAAA ACAGGCTGTG TGCATACGGC TAAGCTTTTT GTAGATGAGA AAACTTTTTT TATAGGTGAA GATATAGCTC AACATAATAC CATAGATAAA GCTTTAGGAA AAGCACGTTT AGCTGGGGTT GATTTAAGTC AATGTTTTTT AATGGTTAGT GGAAGGCTAA GTTCTGAAAT GGTAGCTAAA GCAGTTATGC ATAAAATTCC AGTGCTTGTT TCACGCACGG CTCCTACTTG TTTAGGGGTT ATGATAGCAA GAAAATTTGA TTTAACGCTT TGTGGTTTTG CTAGAGAAAA TAAGATCAAT ATTTATAGTG GAGAATTTAG AATTCATGGA TAA
|
Protein sequence | MDPLFTTQIL KYKGNESFTC DDTLVREIKL EIFINDEKVG ALMATPVDEQ ALAIGYLMSE NIIAKVSDIE SIETKDDGMS VHIKAKIDKE NLAKLNAEGV VISGCGRAHT ANIDPEAIEA SKISSDAKFS KGEILKQMST FYTQCELYEK TGCVHTAKLF VDEKTFFIGE DIAQHNTIDK ALGKARLAGV DLSQCFLMVS GRLSSEMVAK AVMHKIPVLV SRTAPTCLGV MIARKFDLTL CGFARENKIN IYSGEFRIHG
|
| |