| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1216 |
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| Symbol | |
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| ID | 7271494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 1250365 |
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| End bp | 1251150 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643569853 |
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| Product | formate dehydrogenase family accessory protein FdhD |
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| Protein accession | YP_002466277 |
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| Protein GI | 219851845 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1526] Uncharacterized protein required for formate dehydrogenase activity |
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| TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.944709 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.100536 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGTATA AGGAGATCCC CTGTATCAAG AAGAACGGTG ATGAGTATAC GGCTTCAATG
CACCCGGTCG TCGAGGAGGT GCCGGTTGCC CTGTTTGTGA ACGGCAGGCA TGCGGCGACG
GTGATGACCA GTCCGACGAT GCTGAAGGAA CTGATCGTTG GGTTTCTGCT GACCGAAGGG
GTCATCAAAT CGCTCGACGA GATCGAGGCG CTCTCTGTCG ACGATGATCG GGCCGAGGTG
CTGACGAAGA ACCCGTACAA GATCCTCTTC TCGAAGAAGA CGGTGCTGAG CGGGTGCGGG
GGCTCGTCAT CGTTCCTCGA CATGAAAAAA CTTCCGAAGA TCCAATCAGA CCTGACGGTG
ACCCCAGCAC AGGTCTCAAC CGGGCTCAAG GCGGTGCTGA ATTCACCGCT GCATATGCTG
ACCGGCGGAG TGCATGTGGT CGGTCTGATC CAGGGGGATC ACCATCTTGC GATCGTCGAG
GATATCGGGC GGCACAACGC GCTCGATCGG GTGATCGGGT ACGCAGCGCT GAACGGGATC
GATCTCTCGC AGACGTTTGT CGTCTGCACC GGCAGGATCT CTTCAGAGAT GGCACGCAAA
TGTCTGATCG CGAACATTCC GATCATCGTC TCGCGTGGGG CGACGACGAC GCTCGCGGTG
GAGATCGCCA GGGCCGGCGG ACTGACGGTG ATCGGTTTTG TCAGGAGCGA TAAGATGAAT
ATCTACTCCG GGGAGGAGCG GGTGAGCGGG GCCGGTTCAC TGGAGATTCC CGCGCCTGTC
GAGTAG
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| Protein sequence | MMYKEIPCIK KNGDEYTASM HPVVEEVPVA LFVNGRHAAT VMTSPTMLKE LIVGFLLTEG
VIKSLDEIEA LSVDDDRAEV LTKNPYKILF SKKTVLSGCG GSSSFLDMKK LPKIQSDLTV
TPAQVSTGLK AVLNSPLHML TGGVHVVGLI QGDHHLAIVE DIGRHNALDR VIGYAALNGI
DLSQTFVVCT GRISSEMARK CLIANIPIIV SRGATTTLAV EIARAGGLTV IGFVRSDKMN
IYSGEERVSG AGSLEIPAPV E
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