More than 300 homologs were found in PanDaTox collection
for query gene Cpin_4073 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013132  Cpin_4073  formate dehydrogenase family accessory protein FdhD  100 
 
 
280 aa  576  1.0000000000000001e-163  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.110434  normal  0.0860258 
 
 
-
 
NC_013037  Dfer_2665  formate dehydrogenase family accessory protein FdhD  48.91 
 
 
275 aa  276  2e-73  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_3157  formate dehydrogenase family accessory protein FdhD  47.79 
 
 
281 aa  248  9e-65  Spirosoma linguale DSM 74  Bacteria  normal  0.630603  normal 
 
 
-
 
NC_014212  Mesil_2130  formate dehydrogenase family accessory protein FdhD  46.77 
 
 
283 aa  237  2e-61  Meiothermus silvanus DSM 9946  Bacteria  normal  0.455912  normal  0.581272 
 
 
-
 
NC_013946  Mrub_1914  formate dehydrogenase family accessory protein FdhD  45.13 
 
 
285 aa  232  5e-60  Meiothermus ruber DSM 1279  Bacteria  normal  0.84446  hitchhiker  0.0000450272 
 
 
-
 
NC_009523  RoseRS_4019  formate dehydrogenase family accessory protein FdhD  45.99 
 
 
288 aa  229  3e-59  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_0758  formate dehydrogenase family accessory protein FdhD  45.08 
 
 
299 aa  229  3e-59  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_0784  formate dehydrogenase family accessory protein FdhD  45.08 
 
 
299 aa  229  3e-59  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_0145  formate dehydrogenase family accessory protein FdhD  44.04 
 
 
289 aa  225  6e-58  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_0406  formate dehydrogenase family accessory protein FdhD  42.61 
 
 
284 aa  225  7e-58  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_4114  formate dehydrogenase family accessory protein FdhD  44.2 
 
 
293 aa  221  9.999999999999999e-57  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_1157  formate dehydrogenase family accessory protein FdhD  42.55 
 
 
274 aa  220  1.9999999999999999e-56  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_4473  formate dehydrogenase family accessory protein FdhD  44.24 
 
 
276 aa  219  3e-56  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.979472  n/a   
 
 
-
 
NC_013169  Ksed_15020  formate dehydrogenase family accessory protein FdhD  44.27 
 
 
281 aa  218  7.999999999999999e-56  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.503102  normal 
 
 
-
 
NC_009767  Rcas_4385  formate dehydrogenase family accessory protein FdhD  43.36 
 
 
288 aa  217  1e-55  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_12240  formate dehydrogenase family accessory protein FdhD  47.13 
 
 
272 aa  214  9e-55  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_0300  formate dehydrogenase family accessory protein FdhD  45.49 
 
 
268 aa  213  2.9999999999999995e-54  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_3534  formate dehydrogenase family accessory protein FdhD  43.22 
 
 
284 aa  211  7.999999999999999e-54  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1325  formate dehydrogenase  41.3 
 
 
282 aa  210  2e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.201918 
 
 
-
 
NC_009077  Mjls_3577  formate dehydrogenase accessory protein  42.49 
 
 
274 aa  209  4e-53  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_3572  formate dehydrogenase accessory protein  42.49 
 
 
274 aa  209  4e-53  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_3645  formate dehydrogenase accessory protein  42.49 
 
 
274 aa  209  4e-53  Mycobacterium sp. KMS  Bacteria  normal  normal  0.259742 
 
 
-
 
NC_008726  Mvan_4033  formate dehydrogenase accessory protein  42.31 
 
 
287 aa  209  6e-53  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.681532  normal  0.294632 
 
 
-
 
NC_011831  Cagg_1335  formate dehydrogenase family accessory protein FdhD  41.78 
 
 
289 aa  208  8e-53  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.000543766 
 
 
-
 
NC_009338  Mflv_2593  formate dehydrogenase accessory protein  43.38 
 
 
278 aa  207  1e-52  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_1624  formate dehydrogenase accessory protein  45.42 
 
 
275 aa  205  8e-52  Thermobifida fusca YX  Bacteria  normal  0.199677  n/a   
 
 
-
 
NC_009565  TBFG_12913  formate dehydrogenase accessory protein  41.28 
 
 
276 aa  204  9e-52  Mycobacterium tuberculosis F11  Bacteria  normal  0.167876  normal 
 
 
-
 
NC_008541  Arth_0802  formate dehydrogenase family accessory protein FdhD  43.98 
 
 
309 aa  204  9e-52  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_0919  formate dehydrogenase family accessory protein FdhD  44.27 
 
 
292 aa  204  1e-51  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_014151  Cfla_2115  formate dehydrogenase family accessory protein FdhD  40.52 
 
 
273 aa  202  5e-51  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3467  formate dehydrogenase family accessory protein FdhD  42.11 
 
 
294 aa  201  7e-51  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_014158  Tpau_2346  formate dehydrogenase family accessory protein FdhD  42.59 
 
 
284 aa  201  9.999999999999999e-51  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.36394  n/a   
 
 
-
 
NC_013441  Gbro_3682  formate dehydrogenase subunit FdhD  45 
 
 
279 aa  200  1.9999999999999998e-50  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_0829  formate dehydrogenase family accessory protein FdhD  40.79 
 
 
296 aa  199  5e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  hitchhiker  0.00158751 
 
 
-
 
NC_009664  Krad_3339  formate dehydrogenase family accessory protein FdhD  40.58 
 
 
297 aa  197  2.0000000000000003e-49  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.224084 
 
 
-
 
NC_008010  Dgeo_2744  formate dehydrogenase family accessory protein FdhD  43.4 
 
 
251 aa  195  5.000000000000001e-49  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_009440  Msed_1320  formate dehydrogenase family accessory protein FdhD  38.89 
 
 
254 aa  192  5e-48  Metallosphaera sedula DSM 5348  Archaea  normal  normal 
 
 
-
 
NC_008709  Ping_2123  formate dehydrogenase, subunit FdhD  38.81 
 
 
319 aa  192  6e-48  Psychromonas ingrahamii 37  Bacteria  normal  0.951323  hitchhiker  0.00982991 
 
 
-
 
NC_010571  Oter_4145  formate dehydrogenase family accessory protein FdhD  40.75 
 
 
321 aa  191  1e-47  Opitutus terrae PB90-1  Bacteria  normal  normal  0.197477 
 
 
-
 
NC_013235  Namu_1855  formate dehydrogenase family accessory protein FdhD  41.24 
 
 
275 aa  189  4e-47  Nakamurella multipartita DSM 44233  Bacteria  normal  0.121584  normal  0.0332237 
 
 
-
 
CP001800  Ssol_0639  formate dehydrogenase family accessory protein FdhD  36.57 
 
 
255 aa  185  6e-46  Sulfolobus solfataricus 98/2  Archaea  normal  0.444789  n/a   
 
 
-
 
NC_013440  Hoch_0065  formate dehydrogenase family accessory protein FdhD  38.43 
 
 
277 aa  182  8.000000000000001e-45  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.255284 
 
 
-
 
NC_008228  Patl_2845  formate dehydrogenase, subunit FdhD  38.11 
 
 
287 aa  179  2.9999999999999997e-44  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_0667  formate dehydrogenase, subunit FdhD  35.83 
 
 
320 aa  176  3e-43  Acidothermus cellulolyticus 11B  Bacteria  normal  0.187577  normal 
 
 
-
 
NC_009921  Franean1_2306  formate dehydrogenase accessory protein  40.89 
 
 
286 aa  176  4e-43  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_5379  formate dehydrogenase family accessory protein FdhD  38.31 
 
 
248 aa  175  8e-43  Conexibacter woesei DSM 14684  Bacteria  normal  0.0597745  normal 
 
 
-
 
NC_008554  Sfum_0034  formate dehydrogenase family accessory protein FdhD  36.94 
 
 
267 aa  169  5e-41  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.190286  normal  0.450468 
 
 
-
 
NC_008699  Noca_2698  formate dehydrogenase, subunit FdhD  40 
 
 
283 aa  166  2.9999999999999998e-40  Nocardioides sp. JS614  Bacteria  normal  0.0902014  n/a   
 
 
-
 
NC_013172  Bfae_29960  formate dehydrogenase family accessory protein FdhD  39.02 
 
 
290 aa  165  9e-40  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_0873  formate dehydrogenase family accessory protein FdhD  40 
 
 
288 aa  163  4.0000000000000004e-39  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_0877  formate dehydrogenase family accessory protein FdhD  39.85 
 
 
288 aa  161  9e-39  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA1390  formate dehydrogenase accessory protein FdhD  33.33 
 
 
306 aa  148  1.0000000000000001e-34  Methylococcus capsulatus str. Bath  Bacteria  normal  0.780868  n/a   
 
 
-
 
NC_009675  Anae109_3047  formate dehydrogenase family accessory protein FdhD  34.32 
 
 
294 aa  146  4.0000000000000006e-34  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_0826  formate dehydrogenase family accessory protein FdhD  38.29 
 
 
288 aa  145  6e-34  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_3374  formate dehydrogenase family accessory protein FdhD  37.74 
 
 
260 aa  144  2e-33  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_0200  formate dehydrogenase family accessory protein FdhD  34.07 
 
 
272 aa  140  1.9999999999999998e-32  Thauera sp. MZ1T  Bacteria  normal  0.754057  n/a   
 
 
-
 
NC_007947  Mfla_0719  formate dehydrogenase family accessory protein FdhD  34.77 
 
 
278 aa  140  1.9999999999999998e-32  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_2382  formate dehydrogenase family accessory protein FdhD  32.71 
 
 
277 aa  138  1e-31  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1537  formate dehydrogenase family accessory protein FdhD  33.09 
 
 
257 aa  137  3.0000000000000003e-31  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000559479  n/a   
 
 
-
 
NC_013411  GYMC61_1343  formate dehydrogenase accessory protein  34.77 
 
 
263 aa  135  6.0000000000000005e-31  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009901  Spea_0444  formate dehydrogenase accessory protein  34.48 
 
 
287 aa  135  7.000000000000001e-31  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_3588  formate dehydrogenase family accessory protein FdhD  34.75 
 
 
291 aa  135  8e-31  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3264  formate dehydrogenase family accessory protein FdhD  34.24 
 
 
291 aa  135  9.999999999999999e-31  Methylobacterium extorquens PA1  Bacteria  normal  0.859238  normal  0.14649 
 
 
-
 
NC_007348  Reut_B4092  formate dehydrogenase, subunit FdhD  32.44 
 
 
290 aa  132  5e-30  Ralstonia eutropha JMP134  Bacteria  normal  0.2892  n/a   
 
 
-
 
NC_012850  Rleg_3924  formate dehydrogenase accessory protein  34.82 
 
 
274 aa  132  7.999999999999999e-30  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.789424  normal 
 
 
-
 
NC_011369  Rleg2_3635  formate dehydrogenase accessory protein  36.09 
 
 
274 aa  130  2.0000000000000002e-29  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.222739 
 
 
-
 
NC_010717  PXO_00469  formate dehydrogenase accessory protein  32.68 
 
 
273 aa  130  2.0000000000000002e-29  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0885199  n/a   
 
 
-
 
NC_011761  AFE_1654  formate dehydrogenase family accessory protein FdhD  37.07 
 
 
282 aa  129  5.0000000000000004e-29  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_1352  formate dehydrogenase family accessory protein FdhD  37.07 
 
 
282 aa  129  5.0000000000000004e-29  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_4025  formate dehydrogenase accessory protein FdhD  34.09 
 
 
283 aa  129  6e-29  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2817  formate dehydrogenase family accessory protein FdhD  31.37 
 
 
255 aa  128  9.000000000000001e-29  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010725  Mpop_3460  formate dehydrogenase family accessory protein FdhD  33.46 
 
 
291 aa  128  9.000000000000001e-29  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_3516  formate dehydrogenase family accessory protein FdhD  34.05 
 
 
294 aa  126  4.0000000000000003e-28  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_3478  formate dehydrogenase family accessory protein FdhD  32.97 
 
 
292 aa  125  8.000000000000001e-28  Xanthobacter autotrophicus Py2  Bacteria  normal  0.739751  normal  0.474196 
 
 
-
 
NC_011894  Mnod_0254  formate dehydrogenase family accessory protein FdhD  33.45 
 
 
299 aa  125  1e-27  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0343903  n/a   
 
 
-
 
NC_007973  Rmet_1125  formate dehydrogenase family accessory protein FdhD  33.48 
 
 
290 aa  124  1e-27  Cupriavidus metallidurans CH34  Bacteria  normal  0.802085  normal 
 
 
-
 
NC_010511  M446_2355  formate dehydrogenase family accessory protein FdhD  34.2 
 
 
283 aa  124  2e-27  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_009632  SaurJH1_2347  formate dehydrogenase accessory protein  31.2 
 
 
265 aa  124  2e-27  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_2305  formate dehydrogenase accessory protein  31.2 
 
 
265 aa  124  2e-27  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_2149  formate dehydrogenase family accessory protein FdhD  32.55 
 
 
282 aa  123  3e-27  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_0466  formate dehydrogenase accessory protein  34.33 
 
 
262 aa  123  3e-27  Geobacillus sp. WCH70  Bacteria  normal  0.276769  n/a   
 
 
-
 
NC_007973  Rmet_0556  formate dehydrogenase accessory protein  30.8 
 
 
281 aa  123  4e-27  Cupriavidus metallidurans CH34  Bacteria  normal  0.152789  normal  0.415785 
 
 
-
 
NC_009253  Dred_2876  formate dehydrogenase family accessory protein FdhD  30.48 
 
 
262 aa  122  5e-27  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0487293  n/a   
 
 
-
 
NC_009832  Spro_0082  formate dehydrogenase accessory protein  33.33 
 
 
278 aa  122  5e-27  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_0034  formate dehydrogenase family accessory protein FdhD  34.25 
 
 
280 aa  122  5e-27  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.663186 
 
 
-
 
NC_011004  Rpal_0806  formate dehydrogenase accessory protein  35.22 
 
 
276 aa  122  7e-27  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0073  formate dehydrogenase accessory protein  34.7 
 
 
277 aa  120  1.9999999999999998e-26  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1437  formate dehydrogenase family accessory protein FdhD  30.26 
 
 
255 aa  120  1.9999999999999998e-26  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_0582  formate dehydrogenase family accessory protein FdhD  30.3 
 
 
274 aa  120  1.9999999999999998e-26  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007509  Bcep18194_C6967  formate dehydrogenase, subunit FdhD  35.75 
 
 
289 aa  120  3e-26  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_2896  formate dehydrogenase accessory protein  34.48 
 
 
302 aa  119  3.9999999999999996e-26  Sinorhizobium medicae WSM419  Bacteria  normal  0.805678  normal 
 
 
-
 
NC_013517  Sterm_4115  formate dehydrogenase family accessory protein FdhD  36.32 
 
 
255 aa  120  3.9999999999999996e-26  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.271618  n/a   
 
 
-
 
NC_008321  Shewmr4_0108  formate dehydrogenase accessory protein  29.29 
 
 
278 aa  119  3.9999999999999996e-26  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_4096  formate dehydrogenase family accessory protein FdhD  35.22 
 
 
274 aa  119  3.9999999999999996e-26  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010512  Bcenmc03_7065  formate dehydrogenase family accessory protein FdhD  35.87 
 
 
289 aa  119  4.9999999999999996e-26  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.20274  normal  0.543352 
 
 
-
 
NC_008060  Bcen_1423  formate dehydrogenase family accessory protein FdhD  35.87 
 
 
289 aa  119  4.9999999999999996e-26  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_6406  formate dehydrogenase family accessory protein FdhD  35.87 
 
 
289 aa  119  4.9999999999999996e-26  Burkholderia cenocepacia HI2424  Bacteria  normal  0.678396  normal 
 
 
-
 
NC_007347  Reut_A0620  formate dehydrogenase accessory protein  32.33 
 
 
288 aa  119  6e-26  Ralstonia eutropha JMP134  Bacteria  normal  0.979772  n/a   
 
 
-
 
NC_012912  Dd1591_0057  formate dehydrogenase accessory protein  33.86 
 
 
272 aa  119  7e-26  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_0036  formate dehydrogenase accessory protein  35.27 
 
 
274 aa  118  9.999999999999999e-26  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
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