| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1654 |
|---|
| Symbol | fdhD-1 |
|---|
| ID | 7134836 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | + |
|---|
| Start bp | 1423810 |
|---|
| End bp | 1424658 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643530037 |
|---|
| Product | formate dehydrogenase family accessory protein FdhD |
|---|
| Protein accession | YP_002426076 |
|---|
| Protein GI | 218665845 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1526] Uncharacterized protein required for formate dehydrogenase activity |
|---|
| TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATCC ATGGCGAATT AGATAGTTGC ATCGGCTGGT CAGCAGCGAC CCTGCTGACC
GGAAAAGGGT TATCGGTTGC CCACCAGGAA GCTGTCCTTG AAGAACGGGC AGTATCCATT
GTCATCAACG GTCAGGCTTA TGCGGTGATG ATGGTGACGC CGGAGCATCT GGATGATTTC
TTTATGGGTT TTCTGTGGAG CGAAGCCATT ATTCACGGCC CCGAGGAAAT TATCGCCTGG
GAACGGATGA CCGAAAATGG CGCCTGGGCC ATCTACCTCC AGCTCACGGC AGCAGCTGCA
GAACGCGCGC AACACAAGCG TCGTCACGTC CTTGGCGGAA GTGCCTGCGG CTTGTGCGGG
ACACCACTCC TGGCCGGGCT CATTCCCTTT GCGCCACTGG AAAGCAGTTT TTGCTGCAAT
CCGGCCTCCA TCCGCACTCT CATGGTCCAG ATGCAGGAGC GACAGGCGCT CAACCACAGT
ACCGGGACAG CCCATGCAGC CATTCTCGGC TATCAACGGG ATTATCTGGT GCGCGAAGAT
ATTGGTCGCC ACAATGCGGT GGATAAAAGT ATTGGTGCAG CCATTCAGCA TGGGCTGAGG
CCCGGCGAAG TCAATGTGCT GGGGATTTCC TCGCGCCTGA GTTTTGAAAT CGTCCTCAAA
GCCATTGGCT TTGGTATTCC GGTGATTGCG GCTATTTCCG GGGTCAGCAG TCTCGCTATC
AAGCTGGCTG AAAGCCATGG TGTTACCCTG ATTGGTTTCG CCCGGAATGA TCGCATGACT
TTGTATGCCC ACCCCGAACG CATCCAGAAA GACTGGGTGC CCGCACTTTC CCCGGTTTGT
GATTATTAA
|
|---|
| Protein sequence | MRIHGELDSC IGWSAATLLT GKGLSVAHQE AVLEERAVSI VINGQAYAVM MVTPEHLDDF
FMGFLWSEAI IHGPEEIIAW ERMTENGAWA IYLQLTAAAA ERAQHKRRHV LGGSACGLCG
TPLLAGLIPF APLESSFCCN PASIRTLMVQ MQERQALNHS TGTAHAAILG YQRDYLVRED
IGRHNAVDKS IGAAIQHGLR PGEVNVLGIS SRLSFEIVLK AIGFGIPVIA AISGVSSLAI
KLAESHGVTL IGFARNDRMT LYAHPERIQK DWVPALSPVC DY
|
|---|
| |