Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0108 |
Symbol | |
ID | 4250987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 122191 |
End bp | 123027 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638116651 |
Product | formate dehydrogenase accessory protein |
Protein accession | YP_732246 |
Protein GI | 113968453 |
COG category | [C] Energy production and conversion |
COG ID | [COG1526] Uncharacterized protein required for formate dehydrogenase activity |
TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATATC ATTCACACGC CGTGGTTACT GAAAGAAAGG TGACCCTTTT AGAACAGGGA CAGGCCTCAG AGTTAACCGA TTATGTGGCT AACGAGGTGC GAGTGGCGCT GGTGTATAAC GGCATCGCCC ACACTGTGAT GCTCGCCAGC CCTGAAAATC TCGAGGAGTT TGCCATTGGC TTTACCTTGT CGGAGCGGAT TGTTTCCCAT GTGAATGAAA TCAAAGGGGT GGATCTGGAG TTCACCCCCG AAGGCGTGCT CATTCAGGTG GAAATCACCC AAAGATGCTT TATGGAACTC AAGCAGCAGC GGCGCAATAT GGCGGGGCGC ACGGGCTGTG GACTCTGTGG TGTGGCGCAG CTAGAAGAGG CGGTTAAACC CGTTATTCGC GTCGACTCGG ACGCCAGATT TAATATCGAT CATCTGCAGC TCGCCCTTGA GCAGATCAAA GAGAATCAAC ATCACTTTAA GCTCACGGGT GCAACCCACG CCGCCATGGG TTTAGACGAG GAAGGACAAA TCATCGCCGC CTTTGAGGAC ATAGGGCGGC ACATTGCACT GGATAAATTA ATCGGTGGAT TTTCAATGCG TCAGGCACAG CGACCTGTCG CCGTGTTGCT CACCAGCCGC GCCAGTTTTG AAATGGTGCA AAAGGCCGCC AGTGCCAATA TCCAAATTCT GTTTGCTATG TCCGCCGTGA CTTCACTGGC GTTGGAATTA GCAGAGAAAA GCAACATCAC GCTTATCGGT TTTTGTCGTA ATGGCAGAGC CACGCTCTAC ACCCATAGTT ATCGACTGTT GGGGATAAAT CGTGGCTGTT TAGCGAAAGC CATCTAA
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Protein sequence | MEYHSHAVVT ERKVTLLEQG QASELTDYVA NEVRVALVYN GIAHTVMLAS PENLEEFAIG FTLSERIVSH VNEIKGVDLE FTPEGVLIQV EITQRCFMEL KQQRRNMAGR TGCGLCGVAQ LEEAVKPVIR VDSDARFNID HLQLALEQIK ENQHHFKLTG ATHAAMGLDE EGQIIAAFED IGRHIALDKL IGGFSMRQAQ RPVAVLLTSR ASFEMVQKAA SANIQILFAM SAVTSLALEL AEKSNITLIG FCRNGRATLY THSYRLLGIN RGCLAKAI
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