More than 300 homologs were found in PanDaTox collection
for query gene Ping_2123 on replicon NC_008709
Organism: Psychromonas ingrahamii 37



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008709  Ping_2123  formate dehydrogenase, subunit FdhD  100 
 
 
319 aa  654    Psychromonas ingrahamii 37  Bacteria  normal  0.951323  hitchhiker  0.00982991 
 
 
-
 
NC_013730  Slin_3157  formate dehydrogenase family accessory protein FdhD  42.39 
 
 
281 aa  211  2e-53  Spirosoma linguale DSM 74  Bacteria  normal  0.630603  normal 
 
 
-
 
NC_013946  Mrub_1914  formate dehydrogenase family accessory protein FdhD  44.81 
 
 
285 aa  205  7e-52  Meiothermus ruber DSM 1279  Bacteria  normal  0.84446  hitchhiker  0.0000450272 
 
 
-
 
NC_011726  PCC8801_0758  formate dehydrogenase family accessory protein FdhD  43.66 
 
 
299 aa  205  1e-51  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_0784  formate dehydrogenase family accessory protein FdhD  43.66 
 
 
299 aa  204  2e-51  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_0145  formate dehydrogenase family accessory protein FdhD  41.83 
 
 
289 aa  202  9e-51  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_0406  formate dehydrogenase family accessory protein FdhD  43.63 
 
 
284 aa  200  1.9999999999999998e-50  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_1335  formate dehydrogenase family accessory protein FdhD  43.32 
 
 
289 aa  199  3.9999999999999996e-50  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.000543766 
 
 
-
 
NC_009523  RoseRS_4019  formate dehydrogenase family accessory protein FdhD  41.18 
 
 
288 aa  195  7e-49  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_4073  formate dehydrogenase family accessory protein FdhD  38.81 
 
 
280 aa  192  7e-48  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.110434  normal  0.0860258 
 
 
-
 
NC_013510  Tcur_3534  formate dehydrogenase family accessory protein FdhD  39.85 
 
 
284 aa  191  1e-47  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_4385  formate dehydrogenase family accessory protein FdhD  38.23 
 
 
288 aa  187  2e-46  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1325  formate dehydrogenase  38.54 
 
 
282 aa  186  4e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.201918 
 
 
-
 
NC_014212  Mesil_2130  formate dehydrogenase family accessory protein FdhD  36.92 
 
 
283 aa  184  2.0000000000000003e-45  Meiothermus silvanus DSM 9946  Bacteria  normal  0.455912  normal  0.581272 
 
 
-
 
NC_014210  Ndas_4114  formate dehydrogenase family accessory protein FdhD  37.87 
 
 
293 aa  182  5.0000000000000004e-45  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_4473  formate dehydrogenase family accessory protein FdhD  40.22 
 
 
276 aa  182  6e-45  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.979472  n/a   
 
 
-
 
NC_013037  Dfer_2665  formate dehydrogenase family accessory protein FdhD  38.43 
 
 
275 aa  181  2e-44  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3467  formate dehydrogenase family accessory protein FdhD  41.3 
 
 
294 aa  178  1e-43  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_007333  Tfu_1624  formate dehydrogenase accessory protein  38.83 
 
 
275 aa  177  2e-43  Thermobifida fusca YX  Bacteria  normal  0.199677  n/a   
 
 
-
 
NC_014151  Cfla_2115  formate dehydrogenase family accessory protein FdhD  40.23 
 
 
273 aa  177  2e-43  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_0065  formate dehydrogenase family accessory protein FdhD  37.23 
 
 
277 aa  174  1.9999999999999998e-42  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.255284 
 
 
-
 
NC_013169  Ksed_15020  formate dehydrogenase family accessory protein FdhD  39.08 
 
 
281 aa  174  1.9999999999999998e-42  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.503102  normal 
 
 
-
 
NC_011886  Achl_0919  formate dehydrogenase family accessory protein FdhD  41.83 
 
 
292 aa  173  2.9999999999999996e-42  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009077  Mjls_3577  formate dehydrogenase accessory protein  38.41 
 
 
274 aa  172  7.999999999999999e-42  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_3572  formate dehydrogenase accessory protein  38.41 
 
 
274 aa  172  7.999999999999999e-42  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_3645  formate dehydrogenase accessory protein  38.41 
 
 
274 aa  172  7.999999999999999e-42  Mycobacterium sp. KMS  Bacteria  normal  normal  0.259742 
 
 
-
 
NC_009664  Krad_3339  formate dehydrogenase family accessory protein FdhD  39.62 
 
 
297 aa  171  1e-41  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.224084 
 
 
-
 
NC_013159  Svir_12240  formate dehydrogenase family accessory protein FdhD  39.06 
 
 
272 aa  171  2e-41  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_008010  Dgeo_2744  formate dehydrogenase family accessory protein FdhD  41.35 
 
 
251 aa  169  8e-41  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_0300  formate dehydrogenase family accessory protein FdhD  39.54 
 
 
268 aa  168  1e-40  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_2306  formate dehydrogenase accessory protein  39.78 
 
 
286 aa  168  1e-40  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_12913  formate dehydrogenase accessory protein  36.82 
 
 
276 aa  167  2e-40  Mycobacterium tuberculosis F11  Bacteria  normal  0.167876  normal 
 
 
-
 
NC_008541  Arth_0802  formate dehydrogenase family accessory protein FdhD  42.54 
 
 
309 aa  166  4e-40  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_0829  formate dehydrogenase family accessory protein FdhD  36.97 
 
 
296 aa  166  5e-40  Catenulispora acidiphila DSM 44928  Bacteria  normal  hitchhiker  0.00158751 
 
 
-
 
NC_009338  Mflv_2593  formate dehydrogenase accessory protein  36.19 
 
 
278 aa  165  1.0000000000000001e-39  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_4033  formate dehydrogenase accessory protein  36.94 
 
 
287 aa  163  4.0000000000000004e-39  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.681532  normal  0.294632 
 
 
-
 
NC_013093  Amir_1157  formate dehydrogenase family accessory protein FdhD  37.64 
 
 
274 aa  162  5.0000000000000005e-39  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_1855  formate dehydrogenase family accessory protein FdhD  38.52 
 
 
275 aa  162  7e-39  Nakamurella multipartita DSM 44233  Bacteria  normal  0.121584  normal  0.0332237 
 
 
-
 
NC_014158  Tpau_2346  formate dehydrogenase family accessory protein FdhD  36.9 
 
 
284 aa  159  4e-38  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.36394  n/a   
 
 
-
 
NC_008578  Acel_0667  formate dehydrogenase, subunit FdhD  33.84 
 
 
320 aa  158  1e-37  Acidothermus cellulolyticus 11B  Bacteria  normal  0.187577  normal 
 
 
-
 
NC_013739  Cwoe_5379  formate dehydrogenase family accessory protein FdhD  39.39 
 
 
248 aa  157  2e-37  Conexibacter woesei DSM 14684  Bacteria  normal  0.0597745  normal 
 
 
-
 
NC_013441  Gbro_3682  formate dehydrogenase subunit FdhD  41.2 
 
 
279 aa  156  5.0000000000000005e-37  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009440  Msed_1320  formate dehydrogenase family accessory protein FdhD  33.21 
 
 
254 aa  155  1e-36  Metallosphaera sedula DSM 5348  Archaea  normal  normal 
 
 
-
 
CP001800  Ssol_0639  formate dehydrogenase family accessory protein FdhD  36.33 
 
 
255 aa  154  2e-36  Sulfolobus solfataricus 98/2  Archaea  normal  0.444789  n/a   
 
 
-
 
NC_010571  Oter_4145  formate dehydrogenase family accessory protein FdhD  37.36 
 
 
321 aa  151  1e-35  Opitutus terrae PB90-1  Bacteria  normal  normal  0.197477 
 
 
-
 
NC_011891  A2cp1_0877  formate dehydrogenase family accessory protein FdhD  37.17 
 
 
288 aa  150  2e-35  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_0873  formate dehydrogenase family accessory protein FdhD  37.27 
 
 
288 aa  151  2e-35  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_2698  formate dehydrogenase, subunit FdhD  39.76 
 
 
283 aa  150  2e-35  Nocardioides sp. JS614  Bacteria  normal  0.0902014  n/a   
 
 
-
 
NC_008554  Sfum_0034  formate dehydrogenase family accessory protein FdhD  38.53 
 
 
267 aa  146  6e-34  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.190286  normal  0.450468 
 
 
-
 
NC_009675  Anae109_3047  formate dehydrogenase family accessory protein FdhD  33.45 
 
 
294 aa  142  5e-33  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_29960  formate dehydrogenase family accessory protein FdhD  36.4 
 
 
290 aa  141  9.999999999999999e-33  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_0826  formate dehydrogenase family accessory protein FdhD  36.53 
 
 
288 aa  138  1e-31  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_4025  formate dehydrogenase accessory protein FdhD  33.45 
 
 
283 aa  133  3.9999999999999996e-30  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_2845  formate dehydrogenase, subunit FdhD  35.29 
 
 
287 aa  132  7.999999999999999e-30  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00469  formate dehydrogenase accessory protein  35.61 
 
 
273 aa  130  4.0000000000000003e-29  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0885199  n/a   
 
 
-
 
NC_010681  Bphyt_0665  formate dehydrogenase family accessory protein FdhD  33.09 
 
 
279 aa  127  2.0000000000000002e-28  Burkholderia phytofirmans PsJN  Bacteria  normal  0.223999  normal 
 
 
-
 
NC_010465  YPK_0036  formate dehydrogenase accessory protein  34.63 
 
 
274 aa  124  2e-27  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_0057  formate dehydrogenase accessory protein  33.77 
 
 
272 aa  124  3e-27  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_4120  formate dehydrogenase accessory protein  34.2 
 
 
274 aa  123  4e-27  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3771  formate dehydrogenase accessory protein  34.2 
 
 
274 aa  123  5e-27  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A4034  formate dehydrogenase, subunit FdhD  33.82 
 
 
279 aa  122  6e-27  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.276271 
 
 
-
 
NC_010512  Bcenmc03_7065  formate dehydrogenase family accessory protein FdhD  34.39 
 
 
289 aa  121  9.999999999999999e-27  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.20274  normal  0.543352 
 
 
-
 
NC_007347  Reut_A0620  formate dehydrogenase accessory protein  32.9 
 
 
288 aa  121  9.999999999999999e-27  Ralstonia eutropha JMP134  Bacteria  normal  0.979772  n/a   
 
 
-
 
NC_008060  Bcen_1423  formate dehydrogenase family accessory protein FdhD  34.39 
 
 
289 aa  121  9.999999999999999e-27  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_6406  formate dehydrogenase family accessory protein FdhD  34.39 
 
 
289 aa  121  9.999999999999999e-27  Burkholderia cenocepacia HI2424  Bacteria  normal  0.678396  normal 
 
 
-
 
NC_007510  Bcep18194_A6044  formate dehydrogenase, subunit FdhD  38.33 
 
 
278 aa  121  1.9999999999999998e-26  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_0582  formate dehydrogenase family accessory protein FdhD  36.78 
 
 
274 aa  120  1.9999999999999998e-26  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_0082  formate dehydrogenase accessory protein  33.91 
 
 
278 aa  121  1.9999999999999998e-26  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_009076  BURPS1106A_0699  formate dehydrogenase accessory protein FdhD  32.6 
 
 
274 aa  120  1.9999999999999998e-26  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0501  formate dehydrogenase accessory protein  33.21 
 
 
268 aa  120  3e-26  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I0569  formate dehydrogenase family accessory protein FdhD  31.88 
 
 
274 aa  120  3e-26  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA0201  formate dehydrogenase accessory protein  32.6 
 
 
274 aa  120  3.9999999999999996e-26  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2414  formate dehydrogenase accessory protein  32.6 
 
 
274 aa  120  3.9999999999999996e-26  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0863  formate dehydrogenase family accessory protein FdhD  32.6 
 
 
274 aa  120  3.9999999999999996e-26  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_2635  formate dehydrogenase family accessory protein FdhD  37.24 
 
 
274 aa  120  3.9999999999999996e-26  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.481847 
 
 
-
 
NC_008785  BMASAVP1_A2744  formate dehydrogenase accessory protein  32.6 
 
 
274 aa  120  3.9999999999999996e-26  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_0684  formate dehydrogenase accessory protein FdhD  32.6 
 
 
274 aa  120  3.9999999999999996e-26  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2334  formate dehydrogenase accessory protein  32.6 
 
 
274 aa  120  3.9999999999999996e-26  Burkholderia mallei NCTC 10229  Bacteria  normal  0.390052  n/a   
 
 
-
 
NC_010508  Bcenmc03_2744  formate dehydrogenase family accessory protein FdhD  37.66 
 
 
284 aa  119  4.9999999999999996e-26  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.135991  normal 
 
 
-
 
NC_008060  Bcen_2105  formate dehydrogenase family accessory protein FdhD  37.66 
 
 
284 aa  119  4.9999999999999996e-26  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.719105  n/a   
 
 
-
 
NC_008390  Bamb_2769  formate dehydrogenase family accessory protein FdhD  37.24 
 
 
274 aa  119  4.9999999999999996e-26  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_2717  formate dehydrogenase family accessory protein FdhD  37.66 
 
 
284 aa  119  4.9999999999999996e-26  Burkholderia cenocepacia HI2424  Bacteria  normal  0.546813  n/a   
 
 
-
 
NC_013421  Pecwa_4441  formate dehydrogenase accessory protein  33.07 
 
 
277 aa  119  6e-26  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_0719  formate dehydrogenase family accessory protein FdhD  32.14 
 
 
278 aa  119  7.999999999999999e-26  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_010087  Bmul_5399  formate dehydrogenase family accessory protein FdhD  35.81 
 
 
284 aa  118  1.9999999999999998e-25  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.286085  normal  0.067336 
 
 
-
 
NC_010622  Bphy_0389  formate dehydrogenase family accessory protein FdhD  33.33 
 
 
273 aa  117  1.9999999999999998e-25  Burkholderia phymatum STM815  Bacteria  normal  normal  0.318407 
 
 
-
 
NC_007348  Reut_B4092  formate dehydrogenase, subunit FdhD  32.32 
 
 
290 aa  118  1.9999999999999998e-25  Ralstonia eutropha JMP134  Bacteria  normal  0.2892  n/a   
 
 
-
 
NC_009943  Dole_1537  formate dehydrogenase family accessory protein FdhD  31.8 
 
 
257 aa  117  1.9999999999999998e-25  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000559479  n/a   
 
 
-
 
NC_008786  Veis_2382  formate dehydrogenase family accessory protein FdhD  33.62 
 
 
277 aa  117  3e-25  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_0444  formate dehydrogenase accessory protein  31.25 
 
 
287 aa  117  3e-25  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_1125  formate dehydrogenase family accessory protein FdhD  33.46 
 
 
290 aa  116  5e-25  Cupriavidus metallidurans CH34  Bacteria  normal  0.802085  normal 
 
 
-
 
NC_009707  JJD26997_1860  formate dehydrogenase accessory protein  33.33 
 
 
260 aa  115  1.0000000000000001e-24  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_0806  formate dehydrogenase accessory protein  33.33 
 
 
276 aa  115  1.0000000000000001e-24  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_0108  formate dehydrogenase accessory protein  29.44 
 
 
278 aa  115  1.0000000000000001e-24  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_0654  formate dehydrogenase accessory protein  31.62 
 
 
268 aa  114  2.0000000000000002e-24  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_0106  formate dehydrogenase accessory protein  31.3 
 
 
278 aa  114  2.0000000000000002e-24  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0110  formate dehydrogenase accessory protein  31.3 
 
 
278 aa  114  2.0000000000000002e-24  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_3020  formate dehydrogenase family accessory protein FdhD  32.9 
 
 
278 aa  114  2.0000000000000002e-24  Variovorax paradoxus S110  Bacteria  normal  0.848082  n/a   
 
 
-
 
NC_007498  Pcar_1840  formate dehydrogenase accessory protein  34.65 
 
 
268 aa  114  2.0000000000000002e-24  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00380429  n/a   
 
 
-
 
NC_009997  Sbal195_0111  formate dehydrogenase accessory protein  30.87 
 
 
278 aa  114  2.0000000000000002e-24  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
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