| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1840 |
|---|
| Symbol | fdhD |
|---|
| ID | 3724530 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 2153931 |
|---|
| End bp | 2154737 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637751442 |
|---|
| Product | formate dehydrogenase accessory protein |
|---|
| Protein accession | YP_357251 |
|---|
| Protein GI | 77919436 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1526] Uncharacterized protein required for formate dehydrogenase activity |
|---|
| TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.00380429 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCAG ACAGGGAACA ACGAGAATTC GATATCCTGC AATACCGGCA GGGGCAGATC
CGTCAGGTTA CGGATGTGGT GGCTGAGGAA TACGATCTGG CGATTCAGGT CAACGGTAAG
GATTTCATCA CATTGCTGTG TACGCCCCGT TCCCTGGAAA ACCTGGTGGT CGGCTTTCTG
TTCTCCGAAG GGGTTATTCA GAGTCGCGAC GAACTGGAAA GCCTGAGTGT CGATGTCGAA
CGGAAACAGG CGCAGGTGAC CCTGGAAAAC AAGGATGCGT TTATGCTGGC CGGAGATCAG
CTCTTTGCCC AGAAGACCGT CACCACCGCT TGCGGCAAAG GGCGATCCAT GTTGTACCTG
GCCGATTTCG GTGACCTTGC CGACCGTATC GAGGGTAACT TCACATTTCA GGCCACCCAT
ATCCTCGATC TGATGGCTCA GTTCAACAGG CAATCTCAGC TGTTTCTGGA TACGGGCGGA
GTGCATAGTT GCGCGCTTTC CGACGGTTCC GGAATCCTGG TTTTCGAAGA GGATATCGGC
CGGCACAATG CCCTGGATAA GATTCTGGGC TATGCCATGC TGCAGGGTAT ATCGTTACAG
GATAAAATGG TTCTGACCAG CGGCAGGATT TCCAGCGAAA TTGTCGGTAA AGTGGCCCGG
CGCGGTATCC CTGCTATTGT TTCCCGTTCC GCACCGACCA GTGCCGCCAT TGAGCAGGCC
CAGGCGCTGG GAATGACCCT GGTCGGTTTT GCCCGTGGCG GCAAGTTTAA TGTCTATACC
CACTTTGATG CTCTGTGCAG TGAGTGA
|
|---|
| Protein sequence | MAADREQREF DILQYRQGQI RQVTDVVAEE YDLAIQVNGK DFITLLCTPR SLENLVVGFL
FSEGVIQSRD ELESLSVDVE RKQAQVTLEN KDAFMLAGDQ LFAQKTVTTA CGKGRSMLYL
ADFGDLADRI EGNFTFQATH ILDLMAQFNR QSQLFLDTGG VHSCALSDGS GILVFEEDIG
RHNALDKILG YAMLQGISLQ DKMVLTSGRI SSEIVGKVAR RGIPAIVSRS APTSAAIEQA
QALGMTLVGF ARGGKFNVYT HFDALCSE
|
|---|
| |