Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | JJD26997_1860 |
Symbol | fdhD |
ID | 5388819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. doylei 269.97 |
Kingdom | Bacteria |
Replicon accession | NC_009707 |
Strand | - |
Start bp | 1643000 |
End bp | 1643782 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640862749 |
Product | formate dehydrogenase accessory protein |
Protein accession | YP_001398809 |
Protein GI | 153951228 |
COG category | [C] Energy production and conversion |
COG ID | [COG1526] Uncharacterized protein required for formate dehydrogenase activity |
TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCCGT TATTTATAAC TCAAATTTTA AAATATAAAG ATGATAAATC TTTTACATGC GATGATACTT TAGTGCGTGA AATTAAGCTT GAAATTTTTA TTAATGATGA AAAAGTAGGT GCTTTAATGG CAACTCCTGT AGATGAACAG GCATTAGCAA TAGGATATTT AATGAGCGAA AATATCATTG CGAAAGTAAG CGATATTGAG AGCATAGAAA TAAAAGATGA TGGTATGAGT GTGCATATTA AAGCAAAGAT TGATAAAGAA AATTTAGCAA AGCTTAATGC TGAAGCTGTA GTTATAAGTG GTTGCGGTAG AGCACATACT GCAAATATTG ATTTAGAAGC TATTGAAGCG AGTAAAATTA GTTCTGATGC AAAATTTAGC AAAGATGAAA TTTTAAAACA AATGAGTACT TTTTATACTC AATGCGAGCT TTATGAGAAA ACAGGCTGTG TGCATACGGC TAAGCTTTTT GTAGATGAGA AAACTTTTTT TATAGGTGAA GATATAGCCC AACATAATAC CATAGATAAA GCTTTAGGAA AGGCGCGTTT AGCCGGGGTT GATTTAAGTC AATGTTTTTT AATGGTTAGT GGAAGGCTAA GTTCTGAAAT GGTAGCTAAA GCAGTTATGC ATAAAATTCC AGTGCTTGTT TCACGCACGG CTCCTACTTG TTTAGGGGTT ATGATAGCAA GAAAATTTGA TTTAACGCTT TGTGGTTTTG CTAGAGAAAA TAAGATCAAT ATTTATAGTG GAGAATTTAG AATTCATGAA TAA
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Protein sequence | MDPLFITQIL KYKDDKSFTC DDTLVREIKL EIFINDEKVG ALMATPVDEQ ALAIGYLMSE NIIAKVSDIE SIEIKDDGMS VHIKAKIDKE NLAKLNAEAV VISGCGRAHT ANIDLEAIEA SKISSDAKFS KDEILKQMST FYTQCELYEK TGCVHTAKLF VDEKTFFIGE DIAQHNTIDK ALGKARLAGV DLSQCFLMVS GRLSSEMVAK AVMHKIPVLV SRTAPTCLGV MIARKFDLTL CGFARENKIN IYSGEFRIHE
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