Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0036 |
Symbol | |
ID | 6090191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 39189 |
End bp | 40013 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641595095 |
Product | formate dehydrogenase accessory protein |
Protein accession | YP_001718803 |
Protein GI | 170022298 |
COG category | [C] Energy production and conversion |
COG ID | [COG1526] Uncharacterized protein required for formate dehydrogenase activity |
TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCCAGA TCAAACCTTC GAGATTATCC TCTAGCGCCG AAATCCGCGG TGCCCGGCAG CTTGACGTGC TACAGCGGCA TAAATTGGCA GAACCACAGC AGGATTGGCT GGCGGAAGAA GTACCCGTTG CATTGGTATA CAACGGCATC TCCCATGTGG TGATGATGGC AACCCCTAAA GATTTGGCTG CCTTCGCGCT GGGCTTTTCG TTATCAGAAG GCATCATTAG CAGCCCACAG GATATCTATG CTATTGAGAT CACCCCCGGC TGCAACGGCA TAGAGGTCAA TATTGAGCTA TCCAGCCGCC GTTTTGCTGG CCTGAAAGAG CGCCGCCGCG CCATGGCAGG GCGTACCGGG TGCGGAGTTT GTGGCATTGA ACAACTGGAC GATATCTTCC GCCCAATCAC TCCGCTACCG TTCACCCAGG CATTTAACTT GGAGCATTTG GATACCGCCC TTGCCCAGCT AAAACAGGTA CAACCGGTCG GTCAACTCAC CGGCTGTACC CATGCTGCCG CGTGGATTAA TCCTGAAGGT GAGTTATTAG GCGGTTGCGA AGATGTAGGT CGCCATGTTG CACTGGATAA GCTACTGGGG ATACGAGCAA AACAGCCGTG GCAACAAGGT GCGGTGCTGG TTTCCAGCCG TGCCAGTTAT GAAATGGTGC AAAAAACGGC CATGTGTGGT GCAGAGATTT TATTTGCCGT CTCCGCCGCC ACCACGCTTG CCGTTGAAGT TGCCGAGCGC TGCAATTTGA CGTTAGTCGG TTTCAGTAAA CCGGGGCGGG CGACGGTGTA TACCCATCCG CAGAGAATAA AATAA
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Protein sequence | MSQIKPSRLS SSAEIRGARQ LDVLQRHKLA EPQQDWLAEE VPVALVYNGI SHVVMMATPK DLAAFALGFS LSEGIISSPQ DIYAIEITPG CNGIEVNIEL SSRRFAGLKE RRRAMAGRTG CGVCGIEQLD DIFRPITPLP FTQAFNLEHL DTALAQLKQV QPVGQLTGCT HAAAWINPEG ELLGGCEDVG RHVALDKLLG IRAKQPWQQG AVLVSSRASY EMVQKTAMCG AEILFAVSAA TTLAVEVAER CNLTLVGFSK PGRATVYTHP QRIK
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