Gene YPK_0036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0036 
Symbol 
ID6090191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp39189 
End bp40013 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content54% 
IMG OID641595095 
Productformate dehydrogenase accessory protein 
Protein accessionYP_001718803 
Protein GI170022298 
COG category[C] Energy production and conversion 
COG ID[COG1526] Uncharacterized protein required for formate dehydrogenase activity 
TIGRFAM ID[TIGR00129] formate dehydrogenase family accessory protein FdhD 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCCAGA TCAAACCTTC GAGATTATCC TCTAGCGCCG AAATCCGCGG TGCCCGGCAG 
CTTGACGTGC TACAGCGGCA TAAATTGGCA GAACCACAGC AGGATTGGCT GGCGGAAGAA
GTACCCGTTG CATTGGTATA CAACGGCATC TCCCATGTGG TGATGATGGC AACCCCTAAA
GATTTGGCTG CCTTCGCGCT GGGCTTTTCG TTATCAGAAG GCATCATTAG CAGCCCACAG
GATATCTATG CTATTGAGAT CACCCCCGGC TGCAACGGCA TAGAGGTCAA TATTGAGCTA
TCCAGCCGCC GTTTTGCTGG CCTGAAAGAG CGCCGCCGCG CCATGGCAGG GCGTACCGGG
TGCGGAGTTT GTGGCATTGA ACAACTGGAC GATATCTTCC GCCCAATCAC TCCGCTACCG
TTCACCCAGG CATTTAACTT GGAGCATTTG GATACCGCCC TTGCCCAGCT AAAACAGGTA
CAACCGGTCG GTCAACTCAC CGGCTGTACC CATGCTGCCG CGTGGATTAA TCCTGAAGGT
GAGTTATTAG GCGGTTGCGA AGATGTAGGT CGCCATGTTG CACTGGATAA GCTACTGGGG
ATACGAGCAA AACAGCCGTG GCAACAAGGT GCGGTGCTGG TTTCCAGCCG TGCCAGTTAT
GAAATGGTGC AAAAAACGGC CATGTGTGGT GCAGAGATTT TATTTGCCGT CTCCGCCGCC
ACCACGCTTG CCGTTGAAGT TGCCGAGCGC TGCAATTTGA CGTTAGTCGG TTTCAGTAAA
CCGGGGCGGG CGACGGTGTA TACCCATCCG CAGAGAATAA AATAA
 
Protein sequence
MSQIKPSRLS SSAEIRGARQ LDVLQRHKLA EPQQDWLAEE VPVALVYNGI SHVVMMATPK 
DLAAFALGFS LSEGIISSPQ DIYAIEITPG CNGIEVNIEL SSRRFAGLKE RRRAMAGRTG
CGVCGIEQLD DIFRPITPLP FTQAFNLEHL DTALAQLKQV QPVGQLTGCT HAAAWINPEG
ELLGGCEDVG RHVALDKLLG IRAKQPWQQG AVLVSSRASY EMVQKTAMCG AEILFAVSAA
TTLAVEVAER CNLTLVGFSK PGRATVYTHP QRIK