Gene Franean1_2306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2306 
Symbol 
ID5670704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2754738 
End bp2755598 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content75% 
IMG OID641241225 
Productformate dehydrogenase accessory protein 
Protein accessionYP_001506646 
Protein GI158314138 
COG category[C] Energy production and conversion 
COG ID[COG1526] Uncharacterized protein required for formate dehydrogenase activity 
TIGRFAM ID[TIGR00129] formate dehydrogenase family accessory protein FdhD 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGCGAG CAAGCGCGCG ACGCCGGGTC ATGCGGGTGA CTCTGGGGGC GGAGCCGACG 
CTTCGGCCCG ACACCGTCGT CGGGGAGGAA CCGCTCGAGA TCCGGGTCGG CGGCCAGCCG
CTGGCGGTCA CCATGCGGAC CCCGGGCGAC GATATGGACC TCGCCGTGGG CTTCCTGATC
GGGGAGGGCC TGATCGCGAC CGCCGCGGAC GTCGCGGGCA TGCGCTACTG CGCCGGCAGT
GAGGGCGCCG TCGACGGCGA GGGCCGGCTG ACCTACAACG TGCTGGACGT GACCCTCGCC
CCCGGCGTGC CCGAGCCGGA GGTCGACCTG CGGCGGAACT TCTACACCAC GAGCTCGTGC
GGGGTGTGCG GGCGGGCGAG CATCGACGCC GTGCGGCTGC GCGGGCGGTA CGAGATCCGC
GACGACCCGC TGCGCATCAC CGCCGAGGTG CTCGTCGACC TGCCGGGACG GCTGCGCCGC
GCGCAGCGGC TGTTCGCGAC GACCGGCGGC CTGCACGCAG CCGCCCTCGC CGACGCCGAC
GGCGAGGTGC TGGCGGTGCG CGAGGACGTC GGCCGGCACA ACGCGGTCGA CAAGGTCGTC
GGGTGGGCGG CGCGGGCGGG GATGGTGCCG CTGCGGGGGC TGGTGCTGCT GGTCAGCGGC
CGGGCGTCGT TCGAGCTGGT GCAGAAGGCG CTGCTGGCCG GGATCCCGGT GCTCGCCGCG
GTGTCGGCGC CGTCGGCGCT CGCCGTCGAC CTGGCGGAGG AGTCCGGGAT GACGCTTGCC
GGGTTCGTCC GCGGGTCGTC GATGAACCTC TACGCCGGGA CGCACCGGGT GATCCTGCCG
GCGGTCGCCG CGGCCCGGTG A
 
Protein sequence
MGRASARRRV MRVTLGAEPT LRPDTVVGEE PLEIRVGGQP LAVTMRTPGD DMDLAVGFLI 
GEGLIATAAD VAGMRYCAGS EGAVDGEGRL TYNVLDVTLA PGVPEPEVDL RRNFYTTSSC
GVCGRASIDA VRLRGRYEIR DDPLRITAEV LVDLPGRLRR AQRLFATTGG LHAAALADAD
GEVLAVREDV GRHNAVDKVV GWAARAGMVP LRGLVLLVSG RASFELVQKA LLAGIPVLAA
VSAPSALAVD LAEESGMTLA GFVRGSSMNL YAGTHRVILP AVAAAR