| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4145 |
|---|
| Symbol | |
|---|
| ID | 6208356 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 5360269 |
|---|
| End bp | 5361234 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641693814 |
|---|
| Product | formate dehydrogenase family accessory protein FdhD |
|---|
| Protein accession | YP_001821019 |
|---|
| Protein GI | 182415953 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1526] Uncharacterized protein required for formate dehydrogenase activity |
|---|
| TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.197477 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCACATC TCGCGCTGGA CGGCGCCTCG TTGCTGAGCA CAGTGCCGGC ACCACCCGCC
GCGTGTTCCC CCGCGCCCCT TTTCCCCGTG TCCTCCGATC TCTGTTGCAC CGAAACCGAC
GAGACACGCG CCGTCCGCGC CGCGCCGAGT TTGCGCTGGT CGCAACGCCG CGGCTGGTCC
TCCGCCGCAG AGACCCTCGC GGTCGAAGCA CCTCTCGCCC TCGAGATCGC CTACGCGCGG
GGCGAGCAGG ACGTCCGCAA GGTCCTCGCC ATCACCATGC GCACGCCCGG CCACGACGCG
GAGCTCGCCG CCGGTTTTCT TCTCGCCGAG GGACTGATCA CGACCGGTGG CGACATCGTC
ACCTCGACCG GGATGCCCGT GAACGCGCGC GGCGAACGCG TGGCCACGCA GCAGGTGCGT
TTGCGCGCTG CGCCTCGCGA GGACCTGCAA CGCCTCAGCC GGGGACTGCT GACCAGTTCC
GCGTGCGGCG TATGCGGGCG GCCTTCGCTC GAAGGCCTGC CGCTCGCGCG CGTGGCGCAG
GATCGCGACG GCGCCACGTG GTCGTGCGCG ACACTCGCCG AGTTGCCCGA ACGGCTCCGA
CGCGAGCAAA CACATTTCTC CGTGACCGGA GGTTCGCACG CCGCCGCGCT TTGGACGCGT
GACGCGGGAC TGCTGGTCGT GCGCGAGGAC GTGGGTCGGC ACAACGCGGT GGACAAAGTC
CTTGGCGCGG CGCTGCTCCG CAATGTCATC TGCACGGGCG CGGCGCTCGT GCTAAGCGGC
CGCGCCAGTT TCGAACTCGT GCAAAAAGCT GCCGCCAGCG GCGTGCCGGT GGTGCTGGCG
GTGGGCGCGC CGTCATCGTT GGCGGCCAGC CTCGCCCACG CCGCGGGGAT TACGCTGATC
GGCTTCGCCC GCGACGCGCG CTTCAACGTC TACACCCACG CCGACCGACT CGCGATGGCC
GGCTAG
|
|---|
| Protein sequence | MSHLALDGAS LLSTVPAPPA ACSPAPLFPV SSDLCCTETD ETRAVRAAPS LRWSQRRGWS
SAAETLAVEA PLALEIAYAR GEQDVRKVLA ITMRTPGHDA ELAAGFLLAE GLITTGGDIV
TSTGMPVNAR GERVATQQVR LRAAPREDLQ RLSRGLLTSS ACGVCGRPSL EGLPLARVAQ
DRDGATWSCA TLAELPERLR REQTHFSVTG GSHAAALWTR DAGLLVVRED VGRHNAVDKV
LGAALLRNVI CTGAALVLSG RASFELVQKA AASGVPVVLA VGAPSSLAAS LAHAAGITLI
GFARDARFNV YTHADRLAMA G
|
|---|
| |